Search results for Metabarcoding
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182 datasets for “Metabarcoding”
- Data.gov Catalog
Lake Superior zooplankton composition data, from 2016, via morphological ID and via DNA metabarcoding
U.S. EPA Office of Research and Development (ORD)Updated 30 Oct 2020
… Different tabs have data from morphological ID and from DNA metabarcoding ID with 4 different genetic markers. This …
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Protocols for phytoplankton metabarcoding
Alric, BenjaminUpdated 16 Jan 2024
Lien vers la fiche source Protocols for Phytoplancton metabarcoding.
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Metabarcoding datasets and bioinformatic scripts for the LEARN_BIOCONTROL project
Vacher, CorinneUpdated 8 Feb 2022
Lien vers la fiche source Metabarcoding datasets describing the foliar mycobiome of grapevine (Vitis vinifera L.) leaves collected …
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eDNA metabarcoding from aquatic biofilms allows studying spatial and temporal fluctuations of fish communities from Lake Geneva
Rivera, SinzianaUpdated 15 Feb 2022
Lien vers la fiche source Supplementary tables of the article“eDNA metabarcoding from aquatic biofilms allows studying spatial …
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Wetlab decision support tool to optimise the PCR amplification of rbcL barcode in diatom DNA metabarcoding
Chardon, CécileUpdated 24 Oct 2022
… a biofilm sample that is problematic for diatom metabarcoding (DNA extraction and PCR steps and take decision regarding …
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- Data.gov Catalog
eDNA Metabarcoding Datasets
Fish and Wildlife ServiceUpdated 1 Jan 2025
… As the eDNA Metabarcoding Monitoring continues its implementation within the AIS EDM program, objectives will be refined to …
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Bioindication diatomées en Guyane française : comparaison microscopie et métabarcoding ADN
Chonova, TeofanaUpdated 13 Aug 2025
… Fichier csv donnant les listes floristiques diatomées obtenues en métabarcoding (méthode des séquences) - taxonomy.csv : Fichier csv donnant …
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- data.gov.au
Metabarcoding in plankton surveys for informing fish spawning areas and monitoring changes in pelagic ecosystems
CSIRO Data Access PortalUpdated 19 Nov 2025
This collection consists of COI metabarcoding raw FASTQ.gz files prepared by CSIRO and SARDI from multiple bulked …
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Metabarcoding data for diatom samples in "Recommendations for the preservation of environmental samples in diatom metabarcoding studies"
Bouchez, AgnesUpdated 19 Oct 2022
Lien vers la fiche source Fastq files obtained by metabarcoding of 216 samples from " Baricevic, Chardon et al …
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Metabarcoding data MetaPDOcheese project
Irlinger, FrançoiseUpdated 28 Jun 2024
Lien vers la fiche source An exhaustive analysis was performed on more than 2,000 microbiota from 44 …
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Bioinformatic scripts used to analyze fungal metabarcoding data obtained from Vitis vinifera leaves
Vacher, CorinneUpdated 29 Jun 2021
… and analyze fungal raw sequence data obtained by metabarcoding foliar, bark and ground cover samples collected in an …
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Metabarcoding de fourreaux de Trichoptères, Forêt de Villecartier 2023 - Zone Atelier Armorique ZAAr
ECOBIO UMR 6553 CNRS Université de RennesUpdated 17 Mar 2026
… ajouter le lien vers le jeu de données ** Microbial community data obtained using 16S, rbcL and ITS metabarcoding …
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Metabarcoding data analysis of fungal communities associated with 203 full-sib oak trees (Quercus robur) located in Bourran (France).
Lesur Kupin, IsabelleUpdated 26 Sept 2022
… 454 sequencing were performed (Roche GS junior).The metabarcoding data we obtained have been analyzed using Bioinformatics scripts …
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Viral metagenomic and fungal ITS metabarcoding data from complex pools of plant samples from southwestern France and for pools of fungal cultures obtained from these plant pools
Ma, YuxinUpdated 12 May 2025
Lien vers la fiche source Using cross-disciplinary approaches to characterize the plant core microbiome, we assessed the …
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Amplicon Sequence Variant (ASV) table obtained by metabarcoding foliar fungal communities in conventional and organic vineyards
Pauvert, CharlieUpdated 30 Jul 2019
Lien vers la fiche source This Amplicon Sequence Variant (ASV) table was obtained by metabarcoding foliar fungal communities …
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- data.gov.au
Raw sequencing data of a Euphausiid-specific metabarcoding marker to detect krill species of the Southern Ocean in environmental DNA samples
Australian Ocean Data NetworkUpdated 23 Jun 2025
This data set contains the raw sequencing data generated with a Euphausiid specific metabarcoding marker (Euph_F: GTGACGATAAGACCCTATA …
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- data.gov.au
Raw sequencing data of a Euphausiid-specific metabarcoding marker to detect krill species of the Southern Ocean in environmental DNA samples
Australian Ocean Data NetworkUpdated 17 Nov 2025
This data set contains the raw sequencing data generated with a Euphausiid specific metabarcoding marker (Euph_F: GTGACGATAAGACCCTATA …
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- data.gov.uk
Metabarcoding data from the guano of insectivorous bats in Sabah, Malaysia
Environmental Information Data CentreUpdated 12 Mar 2019
This dataset includes capture data for insectivorous bats captured with harp traps in Sabah, Malaysia, and dietary metabarcoding …
- data.gov.uk
Dietary metabarcoding reads from stomachs of fish found in the Irish Sea, Celtic Sea, English Channel, and North Sea from 2015 to 2016
Marine Environmental Data & Information NetworkUpdated 23 Jul 2026
Raw sequences produced in 2018 from the stomach samples of lemon sole (n=16), herring (n=36), whiting …
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Metabarcoding data analysis of fungal communities associated with pedunculate oak (Quercus robur) and maritime pine (Pinus pinaster) in the ORPHEE experimental site.
Lesur Kupin, IsabelleUpdated 26 Sept 2022
… The metabarcoding data we obtained were analyzed using QIIME. Raw and filtered ASV Tables are available here. Sample …
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- ODS API