Search results for Metabarcoding
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182 datasets for “Metabarcoding”
- data.gov.au
Environmental DNA data from the RV Investigator South-East Australian Marine Ecosystem Survey (SEA-MES) voyages (IN2023_V05 and IN2024_V03)
CSIRO Data Access PortalUpdated 28 Nov 2025
… The data deposited here is processed data from eDNA metabarcoding assays (i.e. tables with sampling information, sequence …
- Opendatasoft hubLive preview
Données d'analyse pour : "Microbial community transfers across a pilot ripening cellar are increased by cheese wiping"
Fantelli, ReshadUpdated 2 Dec 2025
… Metabarcoding analyses (16S) = `MetaB16S` Metabarcoding analyses (ITS) = `MetaBITSS` Analyses from culture-depend data and from gases data (CO2 …
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- JSON
- GEOJSON
- ODS API
- Data.gov Catalog
Grass Carp Response Program Database
Fish and Wildlife ServiceUpdated 31 Mar 2026
… various research projects (e.g., age estimation, diet metabarcoding, otolith microchemistry/ stable isotope analysis). Sampling focus, protocols, and …
- CSV
- XML
- data.gouv.fr
Rhizosphere-mediated transformation of Arabidopsis thaliana root exudates governs Phelipanche ramosa germination
Ahmed CHOUKRIUpdated 12 Nov 2026
… We combined germination bioassays, bio-guided HPLC, GSL/ITC metabolomics and bacterial (gyrB) and fungal (ITS) metabarcoding, and …
- ZIP
- Opendatasoft hubLive preview
Replication Data for: Unravelling the Dark Web: explainable inference of the diversity of microbial interactions
BOHAN, DavidUpdated 10 Oct 2023
… Here we attempt to unravel the dark web of the plant microbiome embodied in metabarcoding data sampled from …
- CSV
- JSON
- GEOJSON
- ODS API
- Opendatasoft hubLive preview
Diat.barcode, an open-access barcode library for diatoms
Rimet, FredericUpdated 1 Apr 2026
… A ready-to-use subset of the database for metabarcoding analyses is also accessible.
- CSV
- JSON
- GEOJSON
- ODS API
- data.gov.uk
NFI Soil Fungi & Invertebrate Communities
Forestry CommissionUpdated 20 Aug 2026
Soil community data generated through eDNA metabarcoding (marker genes: ITS, 18S, COI) of soil samples collected within National …
- ZIP
- Opendatasoft hubLive preview
Barcoding ADN diatomées : Complétion de la bibliothèque de référence Diat.barcode
RIMET, FrédéricUpdated 5 Oct 2022
… des identifications de séquences ADN environnementales issues de métabarcoding ADN. Nous avons évalué sa complétude pour des échantillons …
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- GEOJSON
- ODS API
- data.gov.uk
NFI Woodland Mammals
Forestry CommissionUpdated 24 Oct 2026
Mammal community data generated through eDNA metabarcoding (mt 16S rRNA) of woodland surface samples (sampled with roller method …
- ZIP
- data.gov.au
A multidisciplinary study of the Tasman Fracture Marine Park pelagic ecosystem
Australian Ocean Data NetworkUpdated 4 Aug 2026
… Scat sampling of predator species combined with DNA metabarcoding techniques were utilised to identify prey species and provide …
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- data.gov.au
A multidisciplinary study of the Tasman Fracture Marine Park pelagic ecosystem
Australian Ocean Data NetworkUpdated 16 Sept 2026
… Scat sampling of predator species combined with DNA metabarcoding techniques were utilised to identify prey species and provide …
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- PNG
- Opendatasoft hubLive preview
Combining morphological and molecular data to study past foraminiferal communities from a temperate coastal sediment core
Univ Angers, Univ Nantes, Univ Le Mans, CNRS, LPG, Laboratoire de Planétologie et Géosciences, UMR 6112, 2 Bd Lavoisier, 49045 Angers Cedex, FranceUpdated 10 Feb 2026
… morphology-based analyses and sedimentary ancient DNA (sedaDNA) metabarcoding. The main objectives are to test the feasibility of …
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- GEOJSON
- ODS API
- Opendatasoft hubLive preview
RMQS1 16S taxonomy
Karimi, BattleUpdated 5 Dec 2023
… Bioinformatics analysis was performed using BIOCOM-PIPE (previously named GNS-PIPE) metabarcoding pipeline. Sequences taxonomic affiliation is based …
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- GEOJSON
- ODS API
- data.gov.au
The utility of dust as a forensic provenancing material. Exploring collection methods and detection limits for environmental DNA, elemental and mineralogical analyses of dust samples
Geoscience Australia DataUpdated 16 Oct 2025
… The advent of Next Generation Sequencing technologies means that metabarcoding of eDNA can uncover microbial, fungal, and even …
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- Opendatasoft hubLive preview
RMQS1 16S microbial habitat
Karimi, BattleUpdated 5 Dec 2023
… Bioinformatics analysis was performed using BIOCOM-PIPE metabarcoding pipeline. OTUs were clustered at 95% using a post-clustering …
- CSV
- JSON
- GEOJSON
- ODS API
- Open Government Canada
Monitoring regional conservation areas using paired environmental DNA and research trawl surveys
Fisheries and Oceans Canada | Pêches et Océans CanadaUpdated 3 Nov 2026
… eDNA metabarcoding is based on the foundations of DNA barcoding, where species are identified solely by their unique …
- ZIP
- FGDB/GDB
- ESRI REST
- CSV
- Opendatasoft hubLive preview
RMQS1 16S unrarefied cleaned sequences
Terrat, SébastienUpdated 27 Aug 2024
… Bioinformatics analysis was performed using BIOCOM-PIPE (previously named GNS-PIPE) metabarcoding pipeline (Terrat et.al. (2019)). See …
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- GEOJSON
- ODS API
- Opendatasoft hubLive preview
RMQS1 16S operational taxonomic units
Terrat, SébastienUpdated 26 Aug 2024
… Bioinformatics analysis was performed using BIOCOM-PIPE (previously named GNS-PIPE) metabarcoding pipeline. OTUs were clustered at 95 …
- CSV
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- GEOJSON
- ODS API
- Open Government Canada
Maritimes Coastal Biodiversity Monitoring Program – Beach Seining
Fisheries and Oceans Canada | Pêches et Océans CanadaUpdated 24 Mar 2026
… We will compare species detections using eDNA metabarcoding to visual surveys (scuba and seine nets) to census eelgrass …
- ESRI REST
- FGDB/GDB
- CSV
- data.gouv.fr
ANGE : Connaitre et faire connaitre le dernier refuge (Corse) de l’Ange de mer commun (Squatina squatina) en France
Office Français de la BiodiversitéUpdated 2 Oct 2026
… bio_med_pnmcca_ange_taxon_adne_metabarcoding_andro_tab - Table des taxons identifiés via caméra : bio_med_pnmcca …