Search results for Metabarcoding
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182 datasets for “Metabarcoding”
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Reads and pairwise distances from 10 samples of diatoms in Geneva lake
Franc, AlainUpdated 7 Mar 2023
Lien vers la fiche source This dataset contains 55 hdf5 files related to 10 samples (one per month …
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- ODS API
- data.gov.au
V4 2018 eDNA, genetic CPR and large-volume eDNA raw sequencing data
Australian Ocean Data NetworkUpdated 23 Jun 2025
In this data set we examined whether eDNA samples can detect similar numbers of species and community compositions …
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- data.gov.au
V4 2018 eDNA, genetic CPR and large-volume eDNA raw sequencing data
Australian Ocean Data NetworkUpdated 17 Nov 2025
In this data set we examined whether eDNA samples can detect similar numbers of species and community compositions …
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- data.gov.au
Macquarie Island Wildlife Monitoring Program - Seabirds and Seals (established 2022)
Australian Ocean Data NetworkUpdated 31 Jul 2026
This is a parent metadata record. See the child records for access to the data. The Macquarie Island …
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- data.gov.au
Environmental DNA amplicon sequences: Murray River, Australia, October 2021, March 2022 and April 2023
CSIRO Data Access PortalUpdated 12 Nov 2026
Illumina MiSeq COI, 16S rDNA and 18S rDNA metabarcode sequences were obtained after PCR amplification of eDNA extracted …
- data.gov.au
Data and Scripts for Tulloch et al - Sampling design influence on airborne eDNA detection
CSIRO Data Access PortalUpdated 12 Nov 2026
… Raw metabarcoding data: 12SV5 and Mam12 amplification sequencing products across multiple experiments Processed FAIRe-formatted metadata: qPCR and …
- data.gov.uk
NFI+ Soil Condition & Health
Forestry CommissionUpdated 9 Sept 2026
… Biological indicators measured include: metabarcoding data (ASVs) only for bacterial and fungal communities. Metabarcoding and taxonomic (counts) data …
- ODS
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Microbial community dispersal in sourdough - data and scripts
VON GASTROW, LucasUpdated 30 Sept 2021
Lien vers la fiche source Metabarcoding and numbering data of sourdough and flour from 46 bakers and farmer …
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- ODS API
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Synaqua - Datatable giving for each sample the number of reads per ASV and the ASV taxonomic identity
RIMET, FrédéricUpdated 9 Sept 2021
… paper "Competition between microbial species in freshwaters? Diatom metabarcoding shows that environmental filtering and mass effect are stronger …
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- ODS API
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Companion guide
Terrat, SébastienUpdated 15 Jul 2025
… reader through the steps used in the study to compute functional diversity indices from a 16S metabarcoding dataset.
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- ODS API
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Microbial community in stream microscale landscape
ECOBIOUpdated 28 Mar 2025
Lien vers la fiche source Microbial community data obtained using 16S, rbcL and ITS metabarcoding. Sample collected in …
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- ODS API
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Microbiota of mature bean seeds and seed exudates
Marie SimoninUpdated 1 Mar 2023
… on microbiota of mature seeds and seed exudates. Metabarcoding 16S-V4, gyrB and ITS1 on Illumina MiSeq. Data …
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- ODS API
- data.gov.au
Molecular Characterisation of the Eukaryotic Planktonic Community During an Ocean Alkalinity Enhancement Field Trial
CSIRO Data Access PortalUpdated 11 Nov 2026
… Planktonic community structure was measured via metabarcoding, while planktonic physiological status was measured via metatranscriptomics.
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Variation of the microbiome of Bactrocera dorsalis with temperature and diet
Hafsi, AbirUpdated 25 Jun 2025
… and diet stress were assessed using 16S rRNA metabarcoding. Experiment were conducted between 2020 and 2021 using La …
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- ODS API
- data.gov.uk
Diet, gut microbiome and parasite data from wild rodents and diet shift data from captive rodents, 2014-2018
Environmental Information Data CentreUpdated 6 Nov 2026
This dataset is a combination of data obtained from a longitudinal live trapping study of wild rodents in …
- ZIP
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Replication data for: "Characterization of bacterial communities of cold-smoked salmon during storage"
Maillet, AurélienUpdated 12 May 2021
… bacterial community of cold smoked salmon by using 16S rRNA gene metabarcoding. This dataset also contains statistical outputs
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- ODS API
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R scripts for "Pauvert et al. 2019. Microbial association networks give relevant insights into plant pathobiomes. BioRxiv, https://doi.org/10.1101/2020.02.21.958033"
Vacher, CorinneUpdated 9 Feb 2021
Lien vers la fiche source R scripts and datafiles used to infer microbial association networks from metabarcoding data …
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- ODS API
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NGS data revealing the phyllosphere microbiome of wheat plants infected by the fungal pathogen Zymoseptoria tritici
Barroso Bergada, DidacUpdated 28 Oct 2022
… The current resource announcement details the fungal and bacterial metabarcoding datasets obtained by sampling wheat leaves infected by …
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- ODS API
- Opendatasoft hubLive preview
Correlation with the software Halla between the immune response and microbiota composition in chicken
Kempf, FlorentUpdated 14 Nov 2024
Lien vers la fiche source Correlations between gut microbial species, assessed by 16S metabarcoding, and significantly differentially expressed …
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- ODS API
- Opendatasoft hubLive preview
Test dataset for assessment FROGS 16S amplicon methodology
Rué, OlivierUpdated 16 Feb 2021
Lien vers la fiche source Grinder (v.0.5.3) (Angly, et al., 2012) was used to simulate …
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- ODS API