Search results for Metabarcoding
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182 datasets for “Metabarcoding”
- data.gov.au
Voyage 4 of the Aurora Australis, 2018 environmental DNA samples analysed with group specific metabarcoding markers
Australian Ocean Data NetworkUpdated 17 Nov 2025
… These samples were processed using six different genetic metabarcoding markers targeting different taxonomic groups within the metazoan clade …
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- data.gov.uk
DNA metabarcoding, plant community and soil environmental data from a 15-month DNA application experiment in southern Iceland, June 2023-October 2024
Environmental Information Data CentreUpdated 6 Nov 2026
… The dataset encompasses 1) DNA metabarcoding data (plants) derived from soil samples; 2) a survey of extant plant …
- ZIP
- Opendatasoft hubLive preview
Test dataset for assessment FROGS ITS methodology
Rué, OlivierUpdated 9 Feb 2021
… methods and tools to process data from Fungi metabarcoding sequencing. Consequently, we have computer-generated reads of 250 …
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- GEOJSON
- ODS API
- data.gov.au
Distinct coral reef habitat communities characterized by environmental DNA metabarcoding
Australian Ocean Data NetworkUpdated 23 Jan 2026
eDNA metabarcoding were applied using the rRNA 18S Universal eukaryote assay to explore differences in community profiles between …
- HTML
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- Opendatasoft hubLive preview
Hatching-data_Gautier-et-al_FIM
Montarry, JosselinUpdated 22 Jun 2021
Lien vers la fiche source Hatching rates of Globodera pallida in native and recolonized soils (A, D, F …
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- GEOJSON
- ODS API
- Open Government Canada
eDNA metabarcoding enriches traditional trawl survey data for monitoring biodiversity in the marine environment
Fisheries and Oceans Canada | Pêches et Océans CanadaUpdated 24 Mar 2026
… Environmental DNA (eDNA) metabarcoding holds promise to address this monitoring challenge. We conducted paired sampling at 54 sites …
- FGDB/GDB
- CSV
- ESRI REST
- HTML
- Opendatasoft hubLive preview
Do sex, age or ecological needs shape an endangered brown bear population diet? New insights from faecal metabarcoding.
Pauly, GrégoireUpdated 13 Oct 2025
… We used metabarcoding and four markers specific to plants, fungi, arthropods and vertebrates to investigate the brown bear …
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- GEOJSON
- ODS API
- Opendatasoft hubLive preview
A richer community of Botryosphaeriaceae within a less diverse community of fungal endophytes in grapevines than in adjacent forest trees revealed by a mixed metabarcoding strategy.
Laurent, BenoitUpdated 1 Apr 2020
… Using an innovative and mixed strategy of metabarcoding, this study aims to investigate the diversity of the fungal …
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- ODS API
- data.gov.au
Ecological assessment of the Scott Reef system using environmental DNA metabarcoding (WEL)
Australian Ocean Data NetworkUpdated 23 Jun 2025
In October 2021, a total of 94 seawater samples were collected approximately 1m below the surface from the …
- AUDIO/BASIC
- Opendatasoft hubLive preview
Absolute quantitation of microbes using 16S rRNA gene metabarcoding: a rapid normalization of relative abundances by quantitative PCR targeting a 16S rRNA gene spike-in standard
Zemb, OlivierUpdated 15 Nov 2019
Lien vers la fiche source Metabarcoding of the 16S rRNA gene is commonly used to characterize microbial communities …
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- ODS API
- Open Government Canada
Living Labs Initiative Ontario freshwater fish environmental monitoring 2022
Environment and Climate Change Canada | Environnement et Changement climatique CanadaUpdated 13 May 2025
… The eDNA metabarcoding data is hosted online in the Sequence Read Archive at the National Center for Biotechnology …
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- data.gov.au
High occurrence of jellyfish predation by black-browed and Campbell albatross identified by DNA metabarcoding
Australian Ocean Data NetworkUpdated 23 Jun 2025
… High occurrence of jellyfish predation by black-browed and Campbell albatross identified by DNA metabarcoding. Molecular Ecology.
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- data.gov.au
High occurrence of jellyfish predation by black-browed and Campbell albatross identified by DNA metabarcoding
Australian Ocean Data NetworkUpdated 17 Nov 2025
… High occurrence of jellyfish predation by black-browed and Campbell albatross identified by DNA metabarcoding. Molecular Ecology.
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- data.gov.au
The secret hidden in dust: Uncovering the potential to use metabarcoding of dust for provenance determination, and the capacity to utilise existing soil reference databases
Geoscience Australia DataUpdated 16 Oct 2025
… We then integrated dust metabarcoding of bacterial and fungal communities into a framework amenable to forensic casework, (i …
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- data.gov.au
Data from initial evaluation of DNA metabarcoding for processing continuous plankton recorder samples
Australian Ocean Data NetworkUpdated 23 Jun 2025
… an evaluation of DNA metabarcoding for processing continuous plankton recorder samples Authors: Bruce Deagle , Laurence Clarke , John Kitchener …
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- data.gov.au
Data from initial evaluation of DNA metabarcoding for processing continuous plankton recorder samples
Australian Ocean Data NetworkUpdated 17 Nov 2025
… an evaluation of DNA metabarcoding for processing continuous plankton recorder samples Authors: Bruce Deagle , Laurence Clarke , John Kitchener …
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- data.gov.au
eDNA metabarcoding data for the publication 'Passive environment DNA (eDNA) sampling is effective for monitoring vessel biofouling in the Southern Ocean'
Australian Ocean Data NetworkUpdated 20 Dec 2025
… All eDNA samples were amplified with two universal metabarcoding markers targeting the 18S rRNA gene V1-V3 region …
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- Opendatasoft hubLive preview
Data of the paper "Environmental matrices need consideration: insights from water and biofilm environmental DNA for multi-taxonomic biomonitoring" (DOI: 10.1002/edn3.70079)
GAUVIN, PAULAUpdated 26 Aug 2025
Lien vers la fiche source - Genetic sequences (FASTQ) of algae (23S) (MiSeq), macroinvertebrates (COI) and fish (12S) (NovaSeq …
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- ODS API
- data.gouv.fr
The indole-3-propionic acid-producing bacteria Clostridium sporogenes protects against influenza
Sandrine AugerUpdated 12 Oct 2026
We investigated the potential protective effects of Clostridium sporogenes, a human anaerobic commensal and indole-3-propionic acid …
- GZ
- TXT
- Opendatasoft hubLive preview
Foliar fungal and bacterial communities of tree species in French Guiana.
Lesur Kupin, IsabelleUpdated 16 Jan 2023
Lien vers la fiche source This dataset gathers bacterial 16s and fungal ITS sequences describing the microbiota of …
- CSV
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- GEOJSON
- ODS API