Search results for Metabarcoding
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182 datasets for “Metabarcoding”
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Replication data for : Impact of DNA extraction and sampling methods on bacterial communities monitored by 16S rDNA metabarcoding in cold-smoked salmon and processing plant surfaces
Maillet, AurelienUpdated 10 Dec 2020
… The aim of this study was to evaluate DNA extraction and sampling methods biases on 16S metabarcoding studies …
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- ODS API
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Bioinformatic scripts to analyze metabarcoding data of fungal communities associated with two grapevine varieties (Vitis vinifera ‘Regent’ and ‘Cabernet-Sauvignon’)
Vacher, CorinneUpdated 3 Feb 2021
Lien vers la fiche source This archive provides the bioinformatic scripts used to analyze a metabarcoding dataset (available …
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- GEOJSON
- ODS API
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Bioinformatic scripts allowing the comparison of fungal metabarcoding pipelines
Pauvert, CharlieUpdated 2 Sept 2019
Lien vers la fiche source This dataset contains scripts and code that can be used to compare metabarcoding …
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- ODS API
- data.gov.uk
Metabarcoding data from the guano of insectivorous bats in Sabah, Malaysia
Environmental Information Data CentreUpdated 30 Oct 2026
This dataset includes capture data for insectivorous bats captured with harp traps in Sabah, Malaysia, and dietary metabarcoding …
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Fish eDNA metabarcoding from aquatic biofilm samples: methodological aspects - Fish reference barcoding library
RIVERA, SinzianaUpdated 29 Nov 2021
Lien vers la fiche source These data supplement the article “Fish eDNA metabarcoding from aquatic biofilm samples: methodological …
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- ODS API
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Statistical analysis scripts to analyze metabarcoding data of fungal communities associated with two grapevine varieties (Vitis vinifera ‘Regent’ and ‘Cabernet-Sauvignon’)
Vacher, CorinneUpdated 15 Dec 2022
Lien vers la fiche source This archive provides the statistical analysis scripts used to analyze a metabarcoding dataset …
- CSV
- JSON
- GEOJSON
- ODS API
- Opendatasoft hubLive preview
Metabarcoding data analysis of foliar fungal communities associated with 84 woody species.
Lesur Kupin, IsabelleUpdated 26 Sept 2022
Lien vers la fiche source These metabarcoding data describe foliar fungal communities collected on 84 woody species planted …
- CSV
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- ODS API
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METABARFOOD - Results on mock communities, choice of the bioinformatics solution
Rué, OlivierUpdated 30 Jun 2023
Lien vers la fiche source Results obtained from mock communities
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- ODS API
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DNA metabarcoding of foliar fungal communities in an untreated vineyard
Vacher, CorinneUpdated 18 Feb 2020
Lien vers la fiche source This sequence dataset (FASTQ format) was obtained by metabarcoding fungal communities of 20 …
- CSV
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- ODS API
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16S RNA metabarcoding dataset from microbiota of Label Rouge broiler carcass rinses
Hautefeuille, SophieUpdated 7 Apr 2025
… Carcasses were cuted in halves and 16S rRNA metabarcoding sequencing was performed before and after 7 days of …
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- ODS API
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Diatom endemism: an assessment in high-altitude alpine lakes covering a large geographical range
RIMET, FrédéricUpdated 2 Jun 2022
Lien vers la fiche source Fasq files, metadata, and communities datatables.
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- ODS API
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Data and analysis workflow for acidification and metabarcoding of serially fermented raw milks
Gapp, ChloéUpdated 9 Sept 2024
… Acidification kinetics were recorded by pH monitoring during each fermentation and bacterial communities were analysed by metabarcoding (V3 …
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- ODS API
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METABARFOOD - Description of the sequences used in mock communities
Rué, OlivierUpdated 30 Jun 2023
Lien vers la fiche source This report gives informations about reference sequences used for the analysis of mock …
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- GEOJSON
- ODS API
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16S RNA metabarcoding dataset from microbiota of conventionnal broiler carcass rinses
Hautefeuille, SophieUpdated 2 Jul 2024
… It includes 16S rRNA metabarcoding data from the broiler carcass rinses, both before and after 7 days of …
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- GEOJSON
- ODS API
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mbctools: A User-Friendly Metabarcoding and Cross-Platform Pipeline for Analyzing Multiple Amplicon Sequencing Data across a Large Diversity of Organisms
Manzanilla, VincentUpdated 23 Jan 2024
… cruzi in a sylvatic ecotope of the YP, a metabarcoding approach was used to simultaneously identify vector blood …
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- ODS API
- data.gov.au
Optimised scat collection protocols for dietary DNA metabarcoding in vertebrates
Australian Ocean Data NetworkUpdated 23 Jun 2025
… Optimised scat collection protocols for dietary DNA metabarcoding in vertebrates. Methods in Ecology and Evolution.
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- data.gov.au
Optimised scat collection protocols for dietary DNA metabarcoding in vertebrates
Australian Ocean Data NetworkUpdated 17 Nov 2025
… Optimised scat collection protocols for dietary DNA metabarcoding in vertebrates. Methods in Ecology and Evolution.
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- data.gov.au
Simulated DNA metabarcoding dataset for Macquarie Island Marine Predators
Australian Ocean Data NetworkUpdated 22 Jul 2026
Simulated marine predator dietary data based on DNA metabarcoding datasets from Macquarie Island marine predators. The dataset was …
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Data of the upcoming paper "Evaluating habitat restoration in lake littoral zones using multi-taxa eDNA survey"
GAUVIN, PAULAUpdated 26 Aug 2025
Lien vers la fiche source Sequences and DADA2 scripts
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- ODS API
- data.gov.au
Euphausiid-specific metabarcoding data from eDNA samples collected on the TEMPO voyage
Australian Ocean Data NetworkUpdated 23 Jun 2025
This is a Euphausiid-specific metabarcoding dataset of Southern Ocean eDNA samples collected on the TEMPO voyage in …
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