Search results for Metabarcoding
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91 datasets for “Metabarcoding”
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Protocols for phytoplankton metabarcoding
Alric, BenjaminUpdated 16 Jan 2024
Lien vers la fiche source Protocols for Phytoplancton metabarcoding.
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Metabarcoding datasets and bioinformatic scripts for the LEARN_BIOCONTROL project
Vacher, CorinneUpdated 8 Feb 2022
Lien vers la fiche source Metabarcoding datasets describing the foliar mycobiome of grapevine (Vitis vinifera L.) leaves collected …
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eDNA metabarcoding from aquatic biofilms allows studying spatial and temporal fluctuations of fish communities from Lake Geneva
Rivera, SinzianaUpdated 15 Feb 2022
Lien vers la fiche source Supplementary tables of the article“eDNA metabarcoding from aquatic biofilms allows studying spatial …
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Wetlab decision support tool to optimise the PCR amplification of rbcL barcode in diatom DNA metabarcoding
Chardon, CécileUpdated 24 Oct 2022
… a biofilm sample that is problematic for diatom metabarcoding (DNA extraction and PCR steps and take decision regarding …
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Bioindication diatomées en Guyane française : comparaison microscopie et métabarcoding ADN
Chonova, TeofanaUpdated 13 Aug 2025
… Fichier csv donnant les listes floristiques diatomées obtenues en métabarcoding (méthode des séquences) - taxonomy.csv : Fichier csv donnant …
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Metabarcoding data for diatom samples in "Recommendations for the preservation of environmental samples in diatom metabarcoding studies"
Bouchez, AgnesUpdated 19 Oct 2022
Lien vers la fiche source Fastq files obtained by metabarcoding of 216 samples from " Baricevic, Chardon et al …
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Metabarcoding data MetaPDOcheese project
Irlinger, FrançoiseUpdated 28 Jun 2024
Lien vers la fiche source An exhaustive analysis was performed on more than 2,000 microbiota from 44 …
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Bioinformatic scripts used to analyze fungal metabarcoding data obtained from Vitis vinifera leaves
Vacher, CorinneUpdated 29 Jun 2021
… and analyze fungal raw sequence data obtained by metabarcoding foliar, bark and ground cover samples collected in an …
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Metabarcoding de fourreaux de Trichoptères, Forêt de Villecartier 2023 - Zone Atelier Armorique ZAAr
ECOBIO UMR 6553 CNRS Université de RennesUpdated 17 Mar 2026
… ajouter le lien vers le jeu de données ** Microbial community data obtained using 16S, rbcL and ITS metabarcoding …
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Metabarcoding data analysis of fungal communities associated with 203 full-sib oak trees (Quercus robur) located in Bourran (France).
Lesur Kupin, IsabelleUpdated 26 Sept 2022
… 454 sequencing were performed (Roche GS junior).The metabarcoding data we obtained have been analyzed using Bioinformatics scripts …
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Viral metagenomic and fungal ITS metabarcoding data from complex pools of plant samples from southwestern France and for pools of fungal cultures obtained from these plant pools
Ma, YuxinUpdated 12 May 2025
Lien vers la fiche source Using cross-disciplinary approaches to characterize the plant core microbiome, we assessed the …
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Amplicon Sequence Variant (ASV) table obtained by metabarcoding foliar fungal communities in conventional and organic vineyards
Pauvert, CharlieUpdated 30 Jul 2019
Lien vers la fiche source This Amplicon Sequence Variant (ASV) table was obtained by metabarcoding foliar fungal communities …
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Metabarcoding data analysis of fungal communities associated with pedunculate oak (Quercus robur) and maritime pine (Pinus pinaster) in the ORPHEE experimental site.
Lesur Kupin, IsabelleUpdated 26 Sept 2022
… The metabarcoding data we obtained were analyzed using QIIME. Raw and filtered ASV Tables are available here. Sample …
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Replication data for : Impact of DNA extraction and sampling methods on bacterial communities monitored by 16S rDNA metabarcoding in cold-smoked salmon and processing plant surfaces
Maillet, AurelienUpdated 10 Dec 2020
… The aim of this study was to evaluate DNA extraction and sampling methods biases on 16S metabarcoding studies …
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Bioinformatic scripts to analyze metabarcoding data of fungal communities associated with two grapevine varieties (Vitis vinifera ‘Regent’ and ‘Cabernet-Sauvignon’)
Vacher, CorinneUpdated 3 Feb 2021
Lien vers la fiche source This archive provides the bioinformatic scripts used to analyze a metabarcoding dataset (available …
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Bioinformatic scripts allowing the comparison of fungal metabarcoding pipelines
Pauvert, CharlieUpdated 2 Sept 2019
Lien vers la fiche source This dataset contains scripts and code that can be used to compare metabarcoding …
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Fish eDNA metabarcoding from aquatic biofilm samples: methodological aspects - Fish reference barcoding library
RIVERA, SinzianaUpdated 29 Nov 2021
Lien vers la fiche source These data supplement the article “Fish eDNA metabarcoding from aquatic biofilm samples: methodological …
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Statistical analysis scripts to analyze metabarcoding data of fungal communities associated with two grapevine varieties (Vitis vinifera ‘Regent’ and ‘Cabernet-Sauvignon’)
Vacher, CorinneUpdated 15 Dec 2022
Lien vers la fiche source This archive provides the statistical analysis scripts used to analyze a metabarcoding dataset …
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Metabarcoding data analysis of foliar fungal communities associated with 84 woody species.
Lesur Kupin, IsabelleUpdated 26 Sept 2022
Lien vers la fiche source These metabarcoding data describe foliar fungal communities collected on 84 woody species planted …
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METABARFOOD - Results on mock communities, choice of the bioinformatics solution
Rué, OlivierUpdated 30 Jun 2023
Lien vers la fiche source Results obtained from mock communities
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