Search results for Metabarcoding
FiltersCSV
100 datasets for “Metabarcoding”
- Open Government Canada
Environmental DNA Monitoring in the Eastern Shore Islands Area of Interest - Offshore
Fisheries and Oceans Canada | Pêches et Océans CanadaUpdated 8 Apr 2026
… eDNA metabarcoding is based on the foundations of DNA barcoding, where species are identified solely by their unique …
- ZIP
- ESRI REST
- CSV
- FGDB/GDB
- Opendatasoft hubLive preview
atlas_guyane_lauraceae: a small example of input datasets for running yap!
Franc, AlainUpdated 19 Sept 2022
… examples of some programs available in barcoding and metabarcoding in following gitlabs: `yap` (see yap gitlab ) `disseq` and …
- CSV
- JSON
- GEOJSON
- ODS API
- Opendatasoft hubLive preview
Données de réplication pour : Microbial multiomics approach in understanding blue-veined cheeses bitterness
Theil, SébastienUpdated 13 Jan 2026
… In the present work, microbiological, biochemical, metabarcoding (amplicons sequencing), metagenomic (DNA-Seq) and metatranscriptomic (RNA-Seq) were combined …
- CSV
- JSON
- GEOJSON
- ODS API
- Opendatasoft hubLive preview
French Guiana : RezoFleuve and spatial patterns Projects :
Lassalle, GillesUpdated 10 Apr 2026
… This innovative program employs a combination of methodologies, including stable isotope analysis (carbon and nitrogen) and dietary metabarcoding …
- CSV
- JSON
- GEOJSON
- ODS API
- Open Government Canada
DNA Identified Benthic Macroinvertebrate Taxa Lists
Environment and Climate Change Canada | Environnement et Changement climatique CanadaUpdated 28 Oct 2024
… Taxa lists are based on DNA metabarcoding taxa identification by the Hajibabaei Lab, University of Guelph. The dataset …
- CSV
- TXT
- Opendatasoft hubLive preview
Lac de la Muzelle - Carottage Muz12-I – Plant cover and erosion dynamics : impacts of pastoral activities and climatic changes over the last 1600 years - 2017 – Zone Atelier Alpes (IGSN:IEFRA00A4)
EDYTEMUpdated 28 May 2026
… Here we evaluate an approach based on DNA metabarcoding used on lake sediments to provide high-resolution reconstruction …
- CSV
- JSON
- GEOJSON
- ODS API
- Opendatasoft hubLive preview
Données d'analyse pour : "Microbial community transfers across a pilot ripening cellar are increased by cheese wiping"
Fantelli, ReshadUpdated 2 Dec 2025
… Metabarcoding analyses (16S) = `MetaB16S` Metabarcoding analyses (ITS) = `MetaBITSS` Analyses from culture-depend data and from gases data (CO2 …
- CSV
- JSON
- GEOJSON
- ODS API
- Data.gov Catalog
Grass Carp Response Program Database
Fish and Wildlife ServiceUpdated 31 Mar 2026
… various research projects (e.g., age estimation, diet metabarcoding, otolith microchemistry/ stable isotope analysis). Sampling focus, protocols, and …
- CSV
- XML
- Opendatasoft hubLive preview
Replication Data for: Unravelling the Dark Web: explainable inference of the diversity of microbial interactions
BOHAN, DavidUpdated 10 Oct 2023
… Here we attempt to unravel the dark web of the plant microbiome embodied in metabarcoding data sampled from …
- CSV
- JSON
- GEOJSON
- ODS API
- Opendatasoft hubLive preview
Diat.barcode, an open-access barcode library for diatoms
Rimet, FredericUpdated 1 Apr 2026
… A ready-to-use subset of the database for metabarcoding analyses is also accessible.
- CSV
- JSON
- GEOJSON
- ODS API
- Opendatasoft hubLive preview
Barcoding ADN diatomées : Complétion de la bibliothèque de référence Diat.barcode
RIMET, FrédéricUpdated 5 Oct 2022
… des identifications de séquences ADN environnementales issues de métabarcoding ADN. Nous avons évalué sa complétude pour des échantillons …
- CSV
- JSON
- GEOJSON
- ODS API
- Opendatasoft hubLive preview
Combining morphological and molecular data to study past foraminiferal communities from a temperate coastal sediment core
Univ Angers, Univ Nantes, Univ Le Mans, CNRS, LPG, Laboratoire de Planétologie et Géosciences, UMR 6112, 2 Bd Lavoisier, 49045 Angers Cedex, FranceUpdated 10 Feb 2026
… morphology-based analyses and sedimentary ancient DNA (sedaDNA) metabarcoding. The main objectives are to test the feasibility of …
- CSV
- JSON
- GEOJSON
- ODS API
- Opendatasoft hubLive preview
RMQS1 16S taxonomy
Karimi, BattleUpdated 5 Dec 2023
… Bioinformatics analysis was performed using BIOCOM-PIPE (previously named GNS-PIPE) metabarcoding pipeline. Sequences taxonomic affiliation is based …
- CSV
- JSON
- GEOJSON
- ODS API
- Opendatasoft hubLive preview
RMQS1 16S microbial habitat
Karimi, BattleUpdated 5 Dec 2023
… Bioinformatics analysis was performed using BIOCOM-PIPE metabarcoding pipeline. OTUs were clustered at 95% using a post-clustering …
- CSV
- JSON
- GEOJSON
- ODS API
- Open Government Canada
Monitoring regional conservation areas using paired environmental DNA and research trawl surveys
Fisheries and Oceans Canada | Pêches et Océans CanadaUpdated 3 Nov 2026
… eDNA metabarcoding is based on the foundations of DNA barcoding, where species are identified solely by their unique …
- ZIP
- FGDB/GDB
- ESRI REST
- CSV
- Opendatasoft hubLive preview
RMQS1 16S unrarefied cleaned sequences
Terrat, SébastienUpdated 27 Aug 2024
… Bioinformatics analysis was performed using BIOCOM-PIPE (previously named GNS-PIPE) metabarcoding pipeline (Terrat et.al. (2019)). See …
- CSV
- JSON
- GEOJSON
- ODS API
- Opendatasoft hubLive preview
RMQS1 16S operational taxonomic units
Terrat, SébastienUpdated 26 Aug 2024
… Bioinformatics analysis was performed using BIOCOM-PIPE (previously named GNS-PIPE) metabarcoding pipeline. OTUs were clustered at 95 …
- CSV
- JSON
- GEOJSON
- ODS API
- Open Government Canada
Maritimes Coastal Biodiversity Monitoring Program – Beach Seining
Fisheries and Oceans Canada | Pêches et Océans CanadaUpdated 24 Mar 2026
… We will compare species detections using eDNA metabarcoding to visual surveys (scuba and seine nets) to census eelgrass …
- ESRI REST
- FGDB/GDB
- CSV
- Opendatasoft hubLive preview
Protocole de dépôt en open-access des données de séquençage sur une plateforme ouvèrte
CHONOVA, TeofanaUpdated 28 Jun 2021
… le métabarcoding. L’identification des séquences d’ADN de diatomées est réalisée par bio-informatique. Cette nouvelle méthode …
- CSV
- JSON
- GEOJSON
- ODS API
- Opendatasoft hubLive preview
Phytool v3: a annoted reference barcoding library for algae
RIMET, FrédéricUpdated 15 Mar 2024
… sequencing and short DNA-sequences, such as DNA metabarcoding (Pompanon et al., 2011). For phytoplankton, methodologies have now …
- CSV
- JSON
- GEOJSON
- ODS API