“transcriptome” datasets · Open Data Finder

Filters

139 datasets for “transcriptome”

Opendatasoft hubLive preview
Cancer Stem Cell spatio-temporal analysis
Anquez, FrancoisUpdated 30 Jun 2025
… M., Denoulet, M., Hannebicque, K., ... & Lagadec, C. (2019). Transcriptomic analysis of breast cancer stem cells and development of …
- CSV
- JSON
- GEOJSON
- ODS API
Opendatasoft hubLive preview
Study of the Faux in the Verzy Forest (Fagus sylvatica variety tortuosa) - Supporting information
Lesur Kupin, IsabelleUpdated 20 Oct 2022
… trees) and dwarf mutants, and (ii) genomic features (transcriptome, methylomes, mobilomes, small RNA populations, genomes) of six genotypes …
- CSV
- JSON
- GEOJSON
- ODS API
Opendatasoft hubLive preview
Rpv2 is part of a cluster of NLRs specific to Vitis rotundifolia and confers extreme resistance to grapevine downy mildew
MARSAN, LaurieUpdated 4 Jun 2025
… the annotations (Illumina RNAseq data to generate the transcriptome used to annotate the genes) are available on ENA …
- CSV
- JSON
- GEOJSON
- ODS API
Opendatasoft hubLive preview
Metabarcoding data for diatom samples in "Recommendations for the preservation of environmental samples in diatom metabarcoding studies"
Bouchez, AgnesUpdated 19 Oct 2022
… The resulting three plates with 216 samples were sent to “GenoToul Genomics and Transcriptomics” (GeT-PlaGe, Auzeville, France …
- CSV
- JSON
- GEOJSON
- ODS API
Opendatasoft hubLive preview
Data for Phaeoexplorer publication: Evolutionary genomics of the emergence of brown algae as key components of coastal ecosystems
Godfroy, OlivierUpdated 12 Nov 2024
… transcriptome assemblies for the Phaeoexplorer species (RNA-seq data assembled with Trinity or rnaSPAdes; de-novo-transcriptomes.tar …
- CSV
- JSON
- GEOJSON
- ODS API
Data.gov Catalog
Evaluation of differential gene expression during behavioral development in the honeybee using microarrays and northern blots
National Institutes of HealthUpdated 6 Sept 2025
… Conclusions We have shown the usefulness of this transcriptome-based approach for gene discovery, in particular in the …
- HTML
GovData Germany
Genomics of Terpene Biosynthesis in Dictyoceratid Sponges (Porifera) – What Do We (not) Know?
open.bydataUpdated 14 Nov 2026
… processes in the terrestrial realm by analyzing available transcriptomic and genomic data of Dictyoceratida sponges and 10 other …
- TXT
Opendatasoft hubLive preview
Genetic diversity and population structure of Botryosphaeria dothidea and Neofusicoccum parvum on English walnut (Juglans regia L.) in France
Belair, MarieUpdated 7 Feb 2024
… Genotypes were obtained the microsatellite marker sequencing technology developed and implemented at the Genome Transcriptome Facility of Bordeaux …
- CSV
- JSON
- GEOJSON
- ODS API
Opendatasoft hubLive preview
Raw physiological data describing 5 accessions' response to combined water and nitrogen mild stress in Arabidopsis thaliana (Xue, Loudet et al.)
Loudet, OlivierUpdated 4 Jul 2024
… Corresponding transcriptomics raw data have been deposited in 'NCBI GEO' under accession number GSE206890. Corresponding metabolomics raw data …
- CSV
- JSON
- GEOJSON
- ODS API
Opendatasoft hubLive preview
Raw phenotypic data (rosette growth) describing 5 accessions' response to combined water and nitrogen mild stress in Arabidopsis thaliana (Xue, Loudet et al.)
Loudet, OlivierUpdated 4 Jul 2024
… Corresponding transcriptomics raw data have been deposited in 'NCBI GEO' under accession number GSE206890. Corresponding metabolomics raw data …
- CSV
- JSON
- GEOJSON
- ODS API
Data.gov Catalog
Dose-Response Analysis of RNA-Seq Profiles in Archival Formalin-Fixed Paraffin-Embedded Samples.
U.S. EPA Office of Research and Development (ORD)Updated 1 Dec 2016
… In this study we evaluated transcriptomic dose responses using RNA-seq in paired FFPE and frozen (FROZ) samples …
- VND.OPENXMLFORMATS-OFFICEDOCUMENT.SPREADSHEETML.SHEET
Data.gov Catalog
Bulk RNA sequencing and spatially resolved transcriptional profiling of hippocampi from mice flown on the RR-10 mission
Open Science Data RepositoryUpdated 20 Oct 2026
… Subsequently, spatial transcriptomics libraries were prepared and sequenced.
- BIN
Opendatasoft hubLive preview
Evolutionary processes and cellular functions underlying divergence in Alexandrium minutum
Ifremer, FranceUpdated 10 Nov 2022
… Here, we analyzed the transcriptome wide mRNA sequences, as well as the morphology of 18 strains of Alexandrium …
- CSV
- JSON
- GEOJSON
- ODS API
data.gov.uk
Conversion rate, frequency and state of single nucleotide polymorphism loci for Scots pine Axiom microarray
Environmental Information Data CentreUpdated 6 Nov 2026
… The majority (N = 49,052) were obtained from transcriptome sequencing of four pine species: Pinus sylvestris, Pinus mugo …
- ZIP
Open Government Canada
Impacts of ocean acidification (OA) on phytoplankton productivity, survival, community structure, nutritional quality and trophic transfer efficiency to zooplankton
Fisheries and Oceans Canada | Pêches et Océans CanadaUpdated 24 Mar 2026
… fatty acids (EFAs), bacterial abundance, and genetics (RNA transcriptomics). The sampling was conducted during a 14 day laboratory …
- CSV
- ZIP
Data.gov Catalog
Immune responses to the in vitro LPS assault engineered in the spaceflight multi-omics study
National Aeronautics and Space AdministrationUpdated 23 Apr 2025
… and a concurrent ground study constituted the baseline. Transcriptomic investigation revealed an immune blunting in microgravity; Lbp MyD88 …
- HTML
Opendatasoft hubLive preview
Supplementary information for: The rice ILI2 locus is a bidirectional target of the African Xanthomonas oryzae pv. oryzae major Transcription Activator-Like Effector TalC but does not contribute to disease susceptibility
Doucouré, HindaUpdated 26 Nov 2024
… leaf undergoing infection with Xoo: - The inferred experimental transcriptome following bacterial inoculation. - The gene-level expression analysis output …
- CSV
- JSON
- GEOJSON
- ODS API
data.gov.au
Development of a genetic method to assess bleaching tolerance in corals (MTSRF Project 2.5i.2c)
Australian Ocean Data NetworkUpdated 23 Jun 2025
… This transcriptome consists of over 500 000 DNA sequences that are assembled into 55 000 contigs, of which …
- HTML
- AUDIO/BASIC
data.gov.au
Towards a genomic predictor of bleaching in the coral Acropora millepora (NESP TWQ 4.4, AIMS)
Australian Ocean Data NetworkUpdated 10 Jul 2026
… Previously published transcriptome data were used to predict gene models and annotate the resulting assembly. Further information can …
- HTML
- WMS
- PNG

Portal

Format

Cancer Stem Cell spatio-temporal analysis

Study of the Faux in the Verzy Forest (Fagus sylvatica variety tortuosa) - Supporting information

Rpv2 is part of a cluster of NLRs specific to Vitis rotundifolia and confers extreme resistance to grapevine downy mildew

Metabarcoding data for diatom samples in "Recommendations for the preservation of environmental samples in diatom metabarcoding studies"

Data for Phaeoexplorer publication: Evolutionary genomics of the emergence of brown algae as key components of coastal ecosystems

Evaluation of differential gene expression during behavioral development in the honeybee using microarrays and northern blots

Genomics of Terpene Biosynthesis in Dictyoceratid Sponges (Porifera) – What Do We (not) Know?

Genetic diversity and population structure of Botryosphaeria dothidea and Neofusicoccum parvum on English walnut (Juglans regia L.) in France

Raw physiological data describing 5 accessions' response to combined water and nitrogen mild stress in Arabidopsis thaliana (Xue, Loudet et al.)

Raw phenotypic data (rosette growth) describing 5 accessions' response to combined water and nitrogen mild stress in Arabidopsis thaliana (Xue, Loudet et al.)

Dose-Response Analysis of RNA-Seq Profiles in Archival Formalin-Fixed Paraffin-Embedded Samples.

Bulk RNA sequencing and spatially resolved transcriptional profiling of hippocampi from mice flown on the RR-10 mission

Evolutionary processes and cellular functions underlying divergence in Alexandrium minutum

Conversion rate, frequency and state of single nucleotide polymorphism loci for Scots pine Axiom microarray

Impacts of ocean acidification (OA) on phytoplankton productivity, survival, community structure, nutritional quality and trophic transfer efficiency to zooplankton

Immune responses to the in vitro LPS assault engineered in the spaceflight multi-omics study

Supplementary information for: The rice ILI2 locus is a bidirectional target of the African Xanthomonas oryzae pv. oryzae major Transcription Activator-Like Effector TalC but does not contribute to disease susceptibility

Development of a genetic method to assess bleaching tolerance in corals (MTSRF Project 2.5i.2c)

Towards a genomic predictor of bleaching in the coral Acropora millepora (NESP TWQ 4.4, AIMS)

Search results for transcriptome

Portal

Format