Search results for Bioinformatics
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102 datasets for “Bioinformatics”
- Data.gov Catalog
Challenging Medically-Relevant Genes Benchmark Set
National Institute of Standards and TechnologyUpdated 29 Sept 2021
CMRG v1.00 of a small variant benchmark and structural variant benchmark focused on 273 challenging medically relevant …
- PLAIN
- OCTET-STREAM
- GZIP
- TAB-SEPARATED-VALUES
- Opendatasoft hubLive preview
DMP of GenoToul Bioinfo facility
Hoede, ClaireUpdated 14 Dec 2023
Lien vers la fiche source The data management plan of the infrastructure concerns three types of data: • Data …
- CSV
- JSON
- GEOJSON
- ODS API
- Opendatasoft hubLive preview
Cupressus sempervirens transcriptomic data
Lesur Kupin, IsabelleUpdated 3 Feb 2026
Lien vers la fiche source Isoseq sequence analysis was perfomed on transcriptomic data. Full-length transcript sequences obtained …
- CSV
- JSON
- GEOJSON
- ODS API
- Opendatasoft hubLive preview
RMQS1 16S bioinformatic config files and control sample data
Terrat, SébastienUpdated 22 Aug 2024
… This dataset contains config files used to run the bioinformatic pipeline and the control sample data that were …
- CSV
- JSON
- GEOJSON
- ODS API
- Opendatasoft hubLive preview
mbctools: A User-Friendly Metabarcoding and Cross-Platform Pipeline for Analyzing Multiple Amplicon Sequencing Data across a Large Diversity of Organisms
Manzanilla, VincentUpdated 23 Jan 2024
Lien vers la fiche source Test data for the mbctools wrapper. Context and description: Chagas disease (CD) is …
- CSV
- JSON
- GEOJSON
- ODS API
- Opendatasoft hubLive preview
ICEscreen
Lacroix, ThomasUpdated 6 Dec 2022
Lien vers la fiche source ICEscreen is a bioinformatic pipeline for the detection and annotation of ICEs (Integrative …
- CSV
- JSON
- GEOJSON
- ODS API
- data.gouv.fr
MEtabolism Semantic Atlas
INRAEUpdated 18 Sept 2026
MeSA (MEtabolism Semantic Atlas) is an interlinked atlas of RDF quotient graphs that summarizes the structural organization of …
- ZIP
- TTL
- data.gouv.fr
Résultats des tests d'écotoxicologie réalisés lors de la mission de François Galgani en février 2012 dans le cadre du projet CNRT-ADIIP
Institut français de recherche pour l'exploitation de la mer (IFREMER)Updated 9 Dec 2024
Dans le cadre du projet ADIIP - CNRT « Nickel et son environnement », piloté par la société AEL (J.M …
- WMS
- WFS
- WWW:LINK
- Socrata networkLive preview
SARS-CoV-2 Variant Proportions
CORVD Laboratory BranchUpdated 23 Oct 2026
… Sequences contributed to CDC’s national genomic sequencing and bioinformatics efforts fuel this U.S. genomic surveillance system …
- CSV
- JSON
- SODA API
- data.gov.au
Data and scripts: Genetic recapture of Holothuria whitmaei on Lizard island
Australian Ocean Data NetworkUpdated 7 Sept 2026
… 1) vcf file produced by AGRF bioinformaticists, based on sequencing data deposited at: Sequencing was performed on 10B …
- HTML
- TEXT/VCARD
- CSV
- PNG
- Opendatasoft hubLive preview
Development of sequenced-based microsatellite genotyping protocol
Chancerel, EmilieUpdated 30 Oct 2023
… We described an optimized laboratory and bioinformatics workflow for time and cost effective development of sequence-based microsatellite …
- CSV
- JSON
- GEOJSON
- ODS API
- Opendatasoft hubLive preview
MERCI effector-enriched motifs in the 100 first amino acids of M. incognita proteins
Danchin, EtienneUpdated 27 May 2021
… 4 motifs identified as enriched in the known effector proteins as described in (Vens, Rosso, Danchin, Bioinformatics, 2011)
- CSV
- JSON
- GEOJSON
- ODS API
- Opendatasoft hubLive preview
Rapid meiotic prophase chromosome movements in Arabidopsis thaliana are linked to essential reorganization at the nuclear envelope [Supplementary data]
Charif, DelphineUpdated 20 Nov 2024
Lien vers la fiche source This dataset contains the bioinformatic workflow used to detect T-DNA insertion sites …
- CSV
- JSON
- GEOJSON
- ODS API
- Data.gov Catalog
Rice Data
Agricultural Research ServiceUpdated 30 Nov 2023
… Genomics and Bioinformatics Research Unit, Stoneville, MS. Resources in this dataset: Resource Title: Rice_SNP_data_chromosomes_1 …
- ZIP
- Opendatasoft hubLive preview
Replication data for: "Gene Regulatory Network Inference Methodology for Genomic and Transcriptomic Data Acquired in Genetically Related Heterozygote Individuals", 100 simulated datasets of RNA gene expressions of sunflower hybrids
Pomiès, LiseUpdated 23 Oct 2024
… in genetically related heterozygote individuals", Bioinformatics, 2022, https://doi.org/10.1093/bioinformatics/btac445 They are artificial expression …
- CSV
- JSON
- GEOJSON
- ODS API
- Opendatasoft hubLive preview
Leaf microbiome data for European cultivated grapevine (Vitis vinifera L.) during downy mildew (Plasmopara viticola) epidemics in three wine-producing regions in France
Barroso Bergada, DidacUpdated 28 Oct 2022
… We provide the raw metabarcoding datasets, the Amplicon Sequence Variant (ASV) tables obtained after bioinformatic processing, the metadata …
- CSV
- JSON
- GEOJSON
- ODS API
- Opendatasoft hubLive preview
DNA metabarcoding of a mock community of 189 fungal strains associated to plants and soils.
Pauvert, CharlieUpdated 17 Jan 2025
… This sequence dataset was used to compare several bioinformatic approaches (Pauvert et al. Bioinformatics matters: the accuracy of …
- CSV
- JSON
- GEOJSON
- ODS API
- Opendatasoft hubLive preview
NGS data revealing the phyllosphere microbiome of wheat plants infected by the fungal pathogen Zymoseptoria tritici
Barroso Bergada, DidacUpdated 28 Oct 2022
… We provide the raw metabarcoding datasets, the Amplicon Sequence Variant (ASV) tables obtained after bioinformatic processing, the metadata …
- CSV
- JSON
- GEOJSON
- ODS API
- Opendatasoft hubLive preview
The mitochondrial orf117Sha gene desynchronizes pollen development and causes pollen abortion in the Arabidopsis Sha CMS. [Supplementary data]
Charif, DelphineUpdated 16 Apr 2024
Lien vers la fiche source This dataset contains parameters and data used for the bioinformatics analysis performed to …
- CSV
- JSON
- GEOJSON
- ODS API
- data.gov.au
Coral reef invertebrate microbiomes
Australian Ocean Data NetworkUpdated 30 Mar 2026
… Data was analysed using a range of bioinformatic techniques.
- HTML
- PNG