Search results for Human genomics
FiltersJSON
23 datasets for “Human genomics”
- Opendatasoft hubLive preview
Recovery of Metagenome-Assembled Genomes from a Human Fecal Sample with PacBio HiFi Sequencing - Supplementary Material
PLAZA ONATE, FlorianUpdated 12 May 2022
Lien vers la fiche source Characterization of the fecal metagenome from a healthy human donor with the PacBio …
- CSV
- JSON
- GEOJSON
- ODS API
- Opendatasoft hubLive preview
Metagenomic Species Pan-genomes (MSPs) of the human gastrointestinal microbiota
Plaza Oñate, FlorianUpdated 21 Dec 2020
Lien vers la fiche source Metagenomic Species Pan-genomes (MSPs) of the human gastrointestinal microbiota built by binning …
- CSV
- JSON
- GEOJSON
- ODS API
- Opendatasoft hubLive preview
FirmiData: Annotation of ICEs and IMEs in 40 Firmicutes genomes
LAO, JulieUpdated 22 Nov 2024
… Elements (ICEs) and Integrative and Mobilizable Elements (IMEs) and other degenerated ICEs and IMEs in 40 Firmicutes genomes.
- CSV
- JSON
- GEOJSON
- ODS API
- Socrata networkLive preview
COVID-19: SARS-CoV-2 Whole Genome Sequencing (archived)
County of Marin, Health and Human Servics; Napa-Solano-Yolo-Marin-Mendocino Public Health LaboratoryUpdated 2 Apr 2023
… This dataset displays SARS-CoV-2 lineages identified through whole genome sequencing (WGS) in Marin County by date …
- CSV
- JSON
- SODA API
- Opendatasoft hubLive preview
Supplementary files to "Genome wide association study of vaginal microbiota genetic diversity in French women"
ALIZON, SamuelUpdated 27 Jan 2026
… The data mainly consists in genome wide association study (GWAS) performed on genotyping data from 168 participants. The …
- CSV
- JSON
- GEOJSON
- ODS API
- Opendatasoft hubLive preview
Updated Metagenomic Species Pan-genomes (MSPs) of the human gastrointestinal microbiota
Plaza Onate, FlorianUpdated 11 Aug 2025
… the updated Integrated Gene Catalog of the human gut microbiota (aka IGC2) 1,989 Metagenomic Species Pangenomes (MSPs …
- CSV
- JSON
- GEOJSON
- ODS API
- Opendatasoft hubLive preview
Synthetic data for GAZEL-ADN blood-saliva comparison
Herzig, AnthonyUpdated 13 Mar 2023
… Finally, we successfully sequenced salivary microbiomes in parallel to human genomes as demonstrated by a comparison against the …
- CSV
- JSON
- GEOJSON
- ODS API
- Opendatasoft hubLive preview
"An approximate likelihood method reveals ancient gene flow between human, chimpanzee and gorilla"
ISEM, Institut des Sciences de l’Evolution, UMR 5554, Université Montpellier, CNRS, IRD, CIRAD, EPHE - Montpellier, FranceUpdated 23 May 2024
… https://orthomam.mbb.cnrs.fr/) and UCSC Genome Browser (https://genome.ucsc.edu/) databases. The OrthoMam database was …
- CSV
- JSON
- GEOJSON
- ODS API
- Opendatasoft hubLive preview
A catalog of genes and species of the human skin microbiota
PLAZA ONATE, FlorianUpdated 4 Oct 2023
… 118 isolate-derived genomes from the HMRGD 246 isolate-derived genomes from the Skin Microbial Genome Collection (SMGC …
- CSV
- JSON
- GEOJSON
- ODS API
- Opendatasoft hubLive preview
A catalog of genes and species of the human oral microbiota
Le Chatelier, EmmanuelleUpdated 12 Aug 2025
… Bacterial Genomes from the Human Oral Microbiome Database (HOMD). Fungal Genomes from the NCBI RefSeq database. Metagenomic Sequencing …
- CSV
- JSON
- GEOJSON
- ODS API
- Opendatasoft hubLive preview
Draft genomes of the algae Tisochrysis lutea strains
Ifremer, FranceUpdated 21 Oct 2021
Lien vers la fiche source In a context of human population increase and depletion of terrestrial resources, exploitation …
- CSV
- JSON
- GEOJSON
- ODS API
- Opendatasoft hubLive preview
Population genomics of African cultivated sorghum: vcf file and passeport and archaeological data
Gilabert, AudeUpdated 9 Sept 2025
… a genomic perspective", available on bioRxiv under the accession 2025.04.16.648676 and is under consideration for …
- CSV
- JSON
- GEOJSON
- ODS API
- Socrata networkLive preview
SARS-CoV-2 Variant Proportions
CDCUpdated 8 Nov 2026
Data is from Health and Human Services Region 5 (MN, WI, IL, IN, MI, OH) To identify and …
- CSV
- JSON
- SODA API
- Opendatasoft hubLive preview
Données de réplication pour deep sequencing of two mock phage communities
Petit, Marie AgnesUpdated 14 Jun 2024
… The first set deals with a synthetic mix of 5 phage genomes. Files have "Acc", "G" or "T7 …
- CSV
- JSON
- GEOJSON
- ODS API
- Opendatasoft hubLive preview
Kmers library for identifying endemic diadromous fish in Europe from degraded DNA (e.g., ancient DNA) - Use of this data with the DeFIS pipeline (Detection of Fauna and Flora: Identification of Species)
Nikolic, NatachaUpdated 17 Feb 2026
… from reference genomes of European endemic diadromous fishes, complemented with outgroup genomes (e.g., human and other non …
- CSV
- JSON
- GEOJSON
- ODS API
- Opendatasoft hubLive preview
Taxonomic profiles, functional profiles and manually curated metadata of human fecal metagenomes from public projects coming from colorectal cancer studies
BARBET, PaulineUpdated 20 May 2025
… Remaining contamination by the host genome was filtered out by mapping reads against the human reference genome (T2T …
- CSV
- JSON
- GEOJSON
- ODS API
- Opendatasoft hubLive preview
STRIKING CONVERGENT SELECTION HISTORY OF WHEAT AND BARLEY AND ITS POTENTIAL FOR BREEDING
Salse, JeromeUpdated 14 Jul 2025
… Comparing genomes of wheat and barley genotypes from around the world, we unveiled genomic footprints of convergent selection …
- CSV
- JSON
- GEOJSON
- ODS API
- Opendatasoft hubLive preview
Intergenic RNAPII Atlas : output data
Ballester, BenoitUpdated 19 Jun 2024
… This dataset represents the RNAPII (RNAP2) Atlas of potentially transcribed intergenic regions of the human genome by integrating …
- CSV
- JSON
- GEOJSON
- ODS API
- Opendatasoft hubLive preview
Data associated with the article entitled: "A conserved NR5A1-responsive enhancer regulates SRY in testis-determination"
Houzelstein, DenisUpdated 25 Oct 2024
… for appropriate SRY expression in human testis-determination. Deleting this enhancer using genome editing in an in vitro …
- CSV
- JSON
- GEOJSON
- ODS API
- Opendatasoft hubLive preview
BRC4Env, the Biological Resource Centre for the Environment
Mougin, ChristianUpdated 14 Aug 2020
… These biological and/or genomic resources are sampled from soils, sediments, waters, agricultural ecosystems, and preserved in organized …
- CSV
- JSON
- GEOJSON
- ODS API