Search results for transcriptome
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77 datasets for “transcriptome”
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Meloidogyne javanica gene predictions
Danchin, EtienneUpdated 20 Apr 2023
… We used as transcriptional evidence, transcriptome data for M. incognita, as it is the Meloidogyne species with the …
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Meloidogyne luci gene predictions
Danchin, EtienneUpdated 20 Apr 2023
… We used as transcriptional evidence, transcriptome data for M. incognita, as it is the Meloidogyne species with the …
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Meloidogyne incognita gene predictions
Danchin, EtienneUpdated 20 Apr 2023
… We used as transcriptional evidence, transcriptome data for M. incognita, as it is the Meloidogyne species with the …
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Viral metagenomic and fungal ITS metabarcoding data from complex pools of plant samples from southwestern France and for pools of fungal cultures obtained from these plant pools
Ma, YuxinUpdated 12 May 2025
… ITS2 amplicons and sequenced on an Illumina MiSeq sequencer at the Bordeaux Genome Transcriptome Facility (INRA – Pierroton, France).
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TE-related genes: annotation, characterisation, and expression.
Kozlowski, DjampaUpdated 27 May 2021
… tables based on the previously mentioned study's transcriptome. Finally, it contains the scripts, output table and genes …
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Integrative omics approaches reveal mechanisms of combined heat stress and extreme hypoxia tolerance in a Cerambycid beetle larva
Javal, MarionUpdated 2 Mar 2026
… Metabolomics data are published in the supplementary material of the associated article, and transcriptomics data have been deposited …
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Xcc 8004 Re-annotation Bankit Submission Proof
Carrere, SebastienUpdated 22 Jul 2021
… TITLE Xanthomonas transcriptome inside cauliflower hydathodes reveals bacterial virulence strategies and physiological adaptations at early infection stages JOURNAL …
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Cancer Stem Cell spatio-temporal analysis
Anquez, FrancoisUpdated 30 Jun 2025
… M., Denoulet, M., Hannebicque, K., ... & Lagadec, C. (2019). Transcriptomic analysis of breast cancer stem cells and development of …
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Study of the Faux in the Verzy Forest (Fagus sylvatica variety tortuosa) - Supporting information
Lesur Kupin, IsabelleUpdated 20 Oct 2022
… trees) and dwarf mutants, and (ii) genomic features (transcriptome, methylomes, mobilomes, small RNA populations, genomes) of six genotypes …
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Rpv2 is part of a cluster of NLRs specific to Vitis rotundifolia and confers extreme resistance to grapevine downy mildew
MARSAN, LaurieUpdated 4 Jun 2025
… the annotations (Illumina RNAseq data to generate the transcriptome used to annotate the genes) are available on ENA …
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Metabarcoding data for diatom samples in "Recommendations for the preservation of environmental samples in diatom metabarcoding studies"
Bouchez, AgnesUpdated 19 Oct 2022
… The resulting three plates with 216 samples were sent to “GenoToul Genomics and Transcriptomics” (GeT-PlaGe, Auzeville, France …
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Data for Phaeoexplorer publication: Evolutionary genomics of the emergence of brown algae as key components of coastal ecosystems
Godfroy, OlivierUpdated 12 Nov 2024
… transcriptome assemblies for the Phaeoexplorer species (RNA-seq data assembled with Trinity or rnaSPAdes; de-novo-transcriptomes.tar …
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Genetic diversity and population structure of Botryosphaeria dothidea and Neofusicoccum parvum on English walnut (Juglans regia L.) in France
Belair, MarieUpdated 7 Feb 2024
… Genotypes were obtained the microsatellite marker sequencing technology developed and implemented at the Genome Transcriptome Facility of Bordeaux …
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Raw physiological data describing 5 accessions' response to combined water and nitrogen mild stress in Arabidopsis thaliana (Xue, Loudet et al.)
Loudet, OlivierUpdated 4 Jul 2024
… Corresponding transcriptomics raw data have been deposited in 'NCBI GEO' under accession number GSE206890. Corresponding metabolomics raw data …
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Raw phenotypic data (rosette growth) describing 5 accessions' response to combined water and nitrogen mild stress in Arabidopsis thaliana (Xue, Loudet et al.)
Loudet, OlivierUpdated 4 Jul 2024
… Corresponding transcriptomics raw data have been deposited in 'NCBI GEO' under accession number GSE206890. Corresponding metabolomics raw data …
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Evolutionary processes and cellular functions underlying divergence in Alexandrium minutum
Ifremer, FranceUpdated 10 Nov 2022
… Here, we analyzed the transcriptome wide mRNA sequences, as well as the morphology of 18 strains of Alexandrium …
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Supplementary information for: The rice ILI2 locus is a bidirectional target of the African Xanthomonas oryzae pv. oryzae major Transcription Activator-Like Effector TalC but does not contribute to disease susceptibility
Doucouré, HindaUpdated 26 Nov 2024
… leaf undergoing infection with Xoo: - The inferred experimental transcriptome following bacterial inoculation. - The gene-level expression analysis output …
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