Search results for omics
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217 datasets for “omics”
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Supplemental material - publication Irlinger and Monnet, 2021 - JDS
Monnet, ChristopheUpdated 26 Mar 2021
Lien vers la fiche source Supplemental table S1 (Proportion of bacterial or fungal operational taxonomic units (OTUs) in …
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Test dataset for assessment FROGS ITS methodology
Rué, OlivierUpdated 9 Feb 2021
Lien vers la fiche source Our objective was to create datasets allowing, among other things, to test methods …
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Curated sequences of cytochrome P450 from Spodoptera frugiperda rice strain
Hilliou, FrederiqueUpdated 3 Oct 2023
Lien vers la fiche source The project contains fasta files of cytochrome P450 genes and proteins corresponding to …
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Supplementary tables for "Whole blood transcriptome profiles of trypanotolerant and trypanosusceptible cattle highlight a differential modulation of metabolism and immune response during infection by Trypanosoma congolense"
Thévenon, SophieUpdated 13 Jun 2024
Lien vers la fiche source Supplementary figures and tables for "Whole blood transcriptome profiles of trypanotolerant and trypanosusceptible …
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Replication data for: "Characterization of bacterial communities of cold-smoked salmon during storage"
Maillet, AurélienUpdated 12 May 2021
Lien vers la fiche source Information data on the diversity of bacterial communities present on 45 samples of …
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Bioinformatic scripts used to analyze fungal metabarcoding data obtained from Vitis vinifera leaves
Vacher, CorinneUpdated 29 Jun 2021
Lien vers la fiche source Bioinformatic scripts used to sort, filter and analyze fungal raw sequence data obtained …
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M. incognita candidate effector proteins
Danchin, EtienneUpdated 27 May 2021
Lien vers la fiche source Accession numbers of M. incognita candidate effectors. These proteins are predicted to be …
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R scripts for "Pauvert et al. 2019. Microbial association networks give relevant insights into plant pathobiomes. BioRxiv, https://doi.org/10.1101/2020.02.21.958033"
Vacher, CorinneUpdated 9 Feb 2021
Lien vers la fiche source R scripts and datafiles used to infer microbial association networks from metabarcoding data …
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Metagenomic analysis of virome cross-talk between cultivated Solanum lycopersicum and wild Solanum nigrum
Ma, YuxinUpdated 25 Jul 2019
Lien vers la fiche source We selected tomato ( Solanum lycopersicum ) and european black nightshade ( Solanum nigrum ) as a …
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M. incognita protein-coding genes expression patterns
Danchin, EtienneUpdated 27 May 2021
Lien vers la fiche source M. incognita protein-coding genes expression values across 4 life stages in triplicates …
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Curated sequences of cytochrome P450 from Spodoptera frugiperda corn strain
Hilliou, FrederiqueUpdated 3 Oct 2023
Lien vers la fiche source The project contains fasta files of cytochrome P450 genes, CDS and proteins corresponding …
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FeedOmics project - learning and validation databases for blood
GONDRET, FlorenceUpdated 17 May 2021
Lien vers la fiche source The FeedOmics project aimed to determine biomarkers of feed efficiency in growing pigs …
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A ready-to-use database for DADA2: Diat.barcode_rbcL_312bp_DADA2 based on Diat.barcode v7
Keck, FrançoisUpdated 18 May 2021
Lien vers la fiche source This database is an adaptation for DADA2 of : Vasselon, Valentin; Rimet, Frederic; Bouchez …
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Viral metagenomic data of crop and wild plant/weed species in horticultural contexts: analysis of viral diversity, prevalence and stability over a two-year period
Ma, YuxinUpdated 31 Jul 2019
Lien vers la fiche source Using purified double-stranded RNAs (dsRNAs) and high-throughput sequencing (HTS) on a …
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Enriched GO terms in predicted dorsal gland effectors
Danchin, EtienneUpdated 11 May 2021
Lien vers la fiche source By cross referencing the list of M. incognita proteins having a predicted signal …
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Microsatellite data from: Evolutionary history of a Scottish harbour seal population
Nikolic, NatachaUpdated 17 Mar 2020
Lien vers la fiche source A total of 93 harbour seal samples from Moray Firth (North East Scotland …
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Differential Adaptation of Propionibacterium freudenreichii CIRM-BIA to cow's milk versus soymilk envirnments modulates its stress tolerance and proteome
Tarnaud, FlorianUpdated 29 Jun 2021
Lien vers la fiche source Propionibacterium freudenreichii adaptation to cow milk versus soymilk environments was studied thanks to …
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Meloidogyne incognita Interproscan annotation
Danchin, EtienneUpdated 27 May 2021
Lien vers la fiche source Interproscan annotation on the 43,718 predicted proteins in the genome of the …
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Experimental validations of TE-impacted coding or regulatory loci
Kozlowski, DjampaUpdated 27 May 2021
Lien vers la fiche source Contains experimental validations results. The sup_mat_2.pptx file summarize: i) Characteristics …
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Impact of oxidative stress (H2O2) on Pseudomonas Graminis - NMR dataset
Lagrée MarieUpdated 26 Jul 2019
Lien vers la fiche source Impact of atmospheric stresses on clouds microorganisms metabolism: the case of H2O2 : The …
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