Search results for Genomics
FiltersJSON
500 datasets for “Genomics”
- Opendatasoft hubLive preview
Recovery of Metagenome-Assembled Genomes from a Human Fecal Sample with PacBio HiFi Sequencing - Supplementary Material
PLAZA ONATE, FlorianUpdated 12 May 2022
Lien vers la fiche source Characterization of the fecal metagenome from a healthy human donor with the PacBio …
- CSV
- JSON
- GEOJSON
- ODS API
- Opendatasoft hubLive preview
Genomic selection for salinity tolerance in japonica rice
Bartholomé, JérômeUpdated 13 Jun 2024
Lien vers la fiche source A reference panel of 239 japonica accessions and 393 lines of breeding population …
- CSV
- JSON
- GEOJSON
- ODS API
- Opendatasoft hubLive preview
A rapid and simple method for assessing and representing genome sequence relatedness : supplementary data
Briand, MartialUpdated 15 Oct 2021
… 5 peer-reviewed and recommended by PCI Genomics, https://doi.org/10.1101/569640).
- CSV
- JSON
- GEOJSON
- ODS API
- Opendatasoft hubLive preview
Genome assembly and annotation of Plasmopara viticola, the grapevine downy mildew pathogen
Dussert, YannUpdated 19 Sept 2020
Lien vers la fiche source This dataset includes the assembly and annotation of the Plasmopara viticola genome (INRA …
- CSV
- JSON
- GEOJSON
- ODS API
- Opendatasoft hubLive preview
Developement of sequence-based microsatellite genotyping methods at the Bordeaux Genome Transcriptome Facility PGTB
Lepais, OlivierUpdated 30 Oct 2023
Lien vers la fiche source Characteristics of the developed sequence-based microsatellite genotyping methods at the Bordeaux Genome …
- CSV
- JSON
- GEOJSON
- ODS API
- Opendatasoft hubLive preview
Gene annotation of the Illumina draft of the Plasmopara viticola genome
Dussert, YannUpdated 12 Jul 2019
… This genome draft has been published in Dussert et al. 2016 (doi.org/10.1128/genomeA.00987-16 …
- CSV
- JSON
- GEOJSON
- ODS API
- Opendatasoft hubLive preview
Diploïd genome assembly and annotation of Plasmopara viticola, INRA-PV221 strain
Minio, AndreaUpdated 21 Sept 2023
… reassembly and re-annotation of the Plasmopara viticola genome (INRA-PV221 strain) using the PacBio long reads previously …
- CSV
- JSON
- GEOJSON
- ODS API
- Opendatasoft hubLive preview
Structural annotation of five Brassica chloroplast genomes
Rousseau-Gueutin, MathieuUpdated 22 Oct 2025
Lien vers la fiche source Structural annotations (.gff) of the chloroplast genomes of five B. rapa and B …
- CSV
- JSON
- GEOJSON
- ODS API
- Opendatasoft hubLive preview
Structural variation of the Charolais breed bovine genome
Eche, CamilleUpdated 20 Nov 2024
Lien vers la fiche source The 5 vcf files contain structural variants detected with respectively Hifi (40X), CLR …
- CSV
- JSON
- GEOJSON
- ODS API
- Opendatasoft hubLive preview
IBIS - Dataset 1 - Genome, transcriptomics and targeted metabolomics of Lactobacillus delbrueckii subsp. delbrueckii CIRM-BIA865 in soy juice
Falentin, HélèneUpdated 22 Oct 2024
Lien vers la fiche source This dataset comprises the complete and annotated genome of Lactobacillus delbrueckii subsp. delbrueckii …
- CSV
- JSON
- GEOJSON
- ODS API
- Opendatasoft hubLive preview
IBIS-Dataset 2-Genome-transcriptomics and biochemical data of soy juice fermented with Lactiplantibacillus plantarum CIRM-BIA777
Falentin, HélèneUpdated 3 Nov 2025
… BIA https://collection-cirmbia.fr/page/Souches_table) sampled throughout the kinetic of acidification, genome and corresponding transcriptome.
- CSV
- JSON
- GEOJSON
- ODS API
- Opendatasoft hubLive preview
Multipartite virus full genome reconstitution dataset
MICHALAKIS, IoannisUpdated 5 Jul 2022
… host transmission of multipartite virus genome segments may lead to complete genome reconstitution’ by Jérémy Di Mattia, Babil …
- CSV
- JSON
- GEOJSON
- ODS API
- Opendatasoft hubLive preview
SeqOccin genome assembly benchmarking
Klopp, ChristopheUpdated 16 Jan 2024
Lien vers la fiche source The archive contains 40 assembly fasta files originating by ten contig producing software …
- CSV
- JSON
- GEOJSON
- ODS API
- Opendatasoft hubLive preview
Comparison of genomic-enabled cross selection criteria for the improvement of inbred line breeding populations
Bouchet, SophieUpdated 16 Mar 2023
… about Comparison of genomic-enabled cross selection criteria . It includes yield adjusted phenotypes of INRAE-AO lines evaluated …
- CSV
- JSON
- GEOJSON
- ODS API
- Opendatasoft hubLive preview
Diversity matters in wheat mixtures : a genomic survey of the impact of genetic diversity on the performance of twelve way Durum wheat mixtures grown in two contrasted and controlled environments
David, JacquesUpdated 3 Nov 2021
Lien vers la fiche source Phenotypic and genotypic data on 96 populations of Durum wheat
- CSV
- JSON
- GEOJSON
- ODS API
- Opendatasoft hubLive preview
Source Data to study Genome assemblies of Musa wild banana ancestors and draw figures.
Baurens, Franc-ChristopheUpdated 21 Aug 2025
Lien vers la fiche source Source data associated with the paper "Unravelling genomic drivers of speciation in Musa …
- CSV
- JSON
- GEOJSON
- ODS API
- Opendatasoft hubLive preview
Genomic prediction in upland rice for aluminum tolerance in Latin America
Grenier, CecileUpdated 3 Sept 2024
Lien vers la fiche source This data set contains a phenotypic information collected on a population of 334 …
- CSV
- JSON
- GEOJSON
- ODS API
- Opendatasoft hubLive preview
Genomic signatures of climate-driven (mal)adaptation in an iconic conifer, the English yew (Taxus baccata L.)
Francisco ThomasUpdated 3 Jun 2025
Lien vers la fiche source This dataset consists of a Variant Call Format (VCF) file containing genomic data …
- CSV
- JSON
- GEOJSON
- ODS API
- Opendatasoft hubLive preview
Oak Genome Sequencing Website
INRAEUpdated 3 Jun 2021
Lien vers la fiche source The oak genome sequencing website, concerning the sequencing of the oak genome and …
- CSV
- JSON
- GEOJSON
- ODS API
- Opendatasoft hubLive preview
Assembly and annotation of 'Regina' sweet cherry genome
Le Dantec, LoickUpdated 23 Nov 2023
… version 1 (V1) of 'Regina' sweet cherry genome, following genome sequencing using PacBio long reads and optical mapping …
- CSV
- JSON
- GEOJSON
- ODS API