Search results for DNA sequence
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77 datasets for “DNA sequence”
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Dataset and script for DNA methylation sequencing imputation test
Duplan, AlexandreUpdated 10 Apr 2025
Lien vers la fiche source Data associated with the publication
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A study of the integration by non-homologous end joining (NHEJ) of a trackable DNA cassette with randomly-generated borders into Yarrowia lipolytica genome sheds light on exogenous DNA extremities degradation and confirms the potential of NHEJ-mediated integration for the design of genome-scale insertional mutant libraries in non-conventional yeasts
Rué, OlivierUpdated 25 Jul 2025
… trackable DNA cassette with randomly-generated borders into Yarrowia lipolytica genome sheds light on exogenous DNA extremities degradation …
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Genomic DNA sequencing from a bulk segregant experiment to map the genetic determinants of natural bracts variation in Arabidopsis thaliana
Dieudonné, SanaUpdated 17 Jul 2024
Lien vers la fiche source Paired-end Illumina sequences of genomic DNA used to map the genetic variant …
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DNA extraction kit comparison
BOUDRY, GaëlleUpdated 13 May 2022
Lien vers la fiche source 16S sequence fasta files of the samples included in the’ comparison of DNA …
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DNA metabarcoding of foliar fungal communities in an untreated vineyard
Vacher, CorinneUpdated 18 Feb 2020
Lien vers la fiche source This sequence dataset (FASTQ format) was obtained by metabarcoding fungal communities of 20 …
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DNA metabarcoding of a mock community of 189 fungal strains associated to plants and soils.
Pauvert, CharlieUpdated 17 Jan 2025
Lien vers la fiche source This sequence dataset (FASTQ format) was obtained by metabarcoding an artificial (mock) fungal …
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DNA metabarcoding of foliar fungal communities in conventional and organic vineyards
Pauvert, CharlieUpdated 7 May 2019
Lien vers la fiche source This sequence dataset (FASTQ format) was obtained by metabarcoding foliar fungal communities in …
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TREEPEACE: Development of target sequence capture and estimation of genomic relatedness in a mixed oak stand
Lesur Kupin, IsabelleUpdated 16 Dec 2024
Lien vers la fiche source Le jeu de données est constitué de 191,281 SNPs identifiés dans 297 …
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Data supplementing the article “Exploring the capacity of aquatic biofilms to act as environmental DNA samplers: test on macroinvertebrate communities in rivers” - Macroinvertebrate reference library
Rivera, SinzianaUpdated 8 Jul 2020
… The reference library contains 15,399 DNA sequences from 5 phyla, 11 classes, 19 orders, 526 families and …
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Rsyst::diatom_rbcl_align_312bp database: a database adapted to DNA metabarcoding (version v7: 23-02-2018)
Vasselon, ValentinUpdated 18 Dec 2024
… 3/ Resulting sequences are dereplicated into Individual Sequence Unit (ISUs) in order to identify taxa sharing identical DNA …
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Library of repeated sequences annotated in Citrus genome assemblies
Giraud, DelphineUpdated 22 Apr 2025
… Construction of a comprehensive library of repeated sequences for the annotation of Citrus genomes. BMC Genomic Data. 2025 …
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Arthemis database
INRAE-CBGPUpdated 9 Dec 2020
… DNA sequences (barcodes) of arthropod species sequenced in INRAE, CIRAD and SupAgro laboratories. We chose to sequence the …
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DNA metabarcoding analysis of the African wolf (Canis lupaster) diet
Gaubert, PhilippeUpdated 18 Feb 2026
Lien vers la fiche source In this study, we characterised for the first time through DNA metabarcoding the …
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micro-organisms data in the DRYvER project
FOULQUIER, ARNAUDUpdated 10 Mar 2026
Lien vers la fiche source Counted values for each MOTU, corresponding nucleotide sequences that were amplified with Euka02 …
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Data of the paper "Environmental matrices need consideration: insights from water and biofilm environmental DNA for multi-taxonomic biomonitoring" (DOI: 10.1002/edn3.70079)
GAUVIN, PAULAUpdated 26 Aug 2025
Lien vers la fiche source - Genetic sequences (FASTQ) of algae (23S) (MiSeq), macroinvertebrates (COI) and fish (12S) (NovaSeq …
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gut microbiota 16S sequencing from mice fed different high fat diets
Gerard, PhilippeUpdated 7 Nov 2022
… fiche source Sequencing data of the V3-V4 region of the 16S rRNA gene from DNA extracted of …
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intestinal microbiota of healthy and overweight Tunisian adults using 16S rRNA gene sequencing
Gerard, PhilippeUpdated 12 Jul 2023
Lien vers la fiche source Sequences of the V3-V4 region of the 16S rRNA gene of DNA …
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Replication data for : Impact of DNA extraction and sampling methods on bacterial communities monitored by 16S rDNA metabarcoding in cold-smoked salmon and processing plant surfaces
Maillet, AurelienUpdated 10 Dec 2020
… was to evaluate DNA extraction and sampling methods biases on 16S metabarcoding studies. Sequencing data were generated by …
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Data associated to the article: Variable fitness effects of bacteriophage resistance mutations in Escherichia coli: implications for phage therapy
DEBARBIEUX, LaurentUpdated 10 Oct 2024
… frequency of phage-resistant clones, growth curves, phenotypes, and genotypes of sequenced clones, adsorption assays and EOP values
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Functional Annotation for 797 plant ns Lipid Transfer Protein
de Lamotte, FrédéricUpdated 11 Aug 2025
… It might be useful for any studies in sequence-structure-function relationships (this is the largest dataset used …
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