Search results for sequencing
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689 datasets for “sequencing”
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Structural variation of the Charolais breed bovine genome
Eche, CamilleUpdated 20 Nov 2024
Lien vers la fiche source The 5 vcf files contain structural variants detected with respectively Hifi (40X), CLR …
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Genotyping of 600 rice accessions from 3 genetic group (O. sativa indica, O. sativa japonica and O. glaberrima) collected in Conakry Guinea between 1979 and 2011
Ahmadi, NourollahUpdated 13 Jun 2024
Lien vers la fiche source Genotyping By Sequencing with ApekI enzyme of 600 accessions from 3 genetic group …
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DROPS maize genotyping elaborate dataset
Nicolas, StéphaneUpdated 6 Nov 2019
… al., (2019) in BMC Plant Biology: "Genotyping-by-sequencing and SNP arrays are complementary for detecting quantitative trait …
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16S-ITS-23S-DB database
Pascal, GéraldineUpdated 28 Sept 2023
Lien vers la fiche source Extraction of 16S-ITS-23S sequences: All GenBank and RefSeq genomes of Archaea …
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MINTIA paper Simulated data
Laguerre, SandrineUpdated 31 Aug 2020
… fosmids used in MINTIA paper (extraction of 15 sets of sequence from 3 genomes x 2 sequencing machines)
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Rsyst::diatom_rbcl_align_312bp database: a database adapted to DNA metabarcoding (version v7: 23-02-2018)
Vasselon, ValentinUpdated 18 Dec 2024
… 2/ Sequences with ambiguities (N), homopolymers > 8 and length < 312bp are removed from the database. 3/ Resulting sequences …
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Dataset of physicochemical, microbiological, and plant root parameters of 135 soils from various urban land uses Blois city, France. Project "En Forme Biensur".
UMR CITERES / Zone Atelier LoireUpdated 19 Nov 2025
… The bacteria, archaea, and fungi sequence data are available on the European Nucleotide Archive system under project accession …
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RPG Explorer Crop successions France 2007-2014, 2007-2020, 2015-2020
Girault, BaptisteUpdated 21 Nov 2022
Lien vers la fiche source Explorez les dynamiques agricoles de votre territoire grâce aux séquences de culture RPG …
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DNA metabarcoding of a mock community of 189 fungal strains associated to plants and soils.
Pauvert, CharlieUpdated 17 Jan 2025
Lien vers la fiche source This sequence dataset (FASTQ format) was obtained by metabarcoding an artificial (mock) fungal …
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02_FASTA_DBOTU_file
Terrat, SébastienUpdated 15 Jul 2025
Lien vers la fiche source Fasta file containing the sequences of the OTUs, stored in the 'Database/ReClustOR …
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DNA metabarcoding of foliar fungal communities in conventional and organic vineyards
Pauvert, CharlieUpdated 7 May 2019
Lien vers la fiche source This sequence dataset (FASTQ format) was obtained by metabarcoding foliar fungal communities in …
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A study of the integration by non-homologous end joining (NHEJ) of a trackable DNA cassette with randomly-generated borders into Yarrowia lipolytica genome sheds light on exogenous DNA extremities degradation and confirms the potential of NHEJ-mediated integration for the design of genome-scale insertional mutant libraries in non-conventional yeasts
Rué, OlivierUpdated 25 Jul 2025
Lien vers la fiche source Analysis report related to the paper "A study of the integration by non …
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CabriTrack: Accelerometer data for automated behavioural monitoring of grazing goats
Bonneau, MathieuUpdated 12 May 2026
… The Sequence_num is used to identify the behavior sequences. Lines of the dataset with the same Sequence …
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Source Data to study Genome assemblies of Musa wild banana ancestors and draw figures.
Baurens, Franc-ChristopheUpdated 21 Aug 2025
… Multifasta files of non redundant repeat sequences identified in genome assemblies that allows for repeated fraction genome analysis …
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04_PICRUSt_results
Terrat, SébastienUpdated 15 Jul 2025
… genes based on marker gene sequences — typically 16S/18S rRNA and ITS sequence) was used on the described …
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Protocole de dépôt en open-access des données de séquençage sur une plateforme ouvèrte
CHONOVA, TeofanaUpdated 28 Jun 2021
… L’UMR Carrtel développe depuis 10 ans une méthode automatisée basée sur du séquençage ADN haut débit d …
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CO1-haplotype frequencies of long-spined sea urchin (Diadema setosum) from the Indo-Malay archipelago
Vimono, Indra B.Updated 5 Oct 2022
… Amplicons were sequenced according to the Sanger protocol. Sequence chromatograms were verified under Chromas v. 2.6.5 …
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DNA metabarcoding of foliar fungal communities in an untreated vineyard
Vacher, CorinneUpdated 18 Feb 2020
Lien vers la fiche source This sequence dataset (FASTQ format) was obtained by metabarcoding fungal communities of 20 …
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Genetic and metabolic resources for Sipha maydis multi-symbiotic system
Renoz, FrancoisUpdated 12 Nov 2024
Lien vers la fiche source The Sipha maydis genome project generated a highly contiguous genome assembly of the …
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Dissecting the control of shoot development in grapevine: genetics and genomics identify potential regulators
Guillaumie, SabineUpdated 10 Feb 2020
… Simple sequence repeat (SSR) markers were mainly chosen from the markers used to construct the map of the …
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