Search results for sequencing
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689 datasets for “sequencing”
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mbctools: A User-Friendly Metabarcoding and Cross-Platform Pipeline for Analyzing Multiple Amplicon Sequencing Data across a Large Diversity of Organisms
Manzanilla, VincentUpdated 23 Jan 2024
Lien vers la fiche source Test data for the mbctools wrapper. Context and description: Chagas disease (CD) is …
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RAD sequencing data from: A first inference of the phylogeography of the worldwide invader Xylosandrus compactus
Urvois, TeddyUpdated 8 Aug 2023
… metadata-RADseq-Xylosandrus-compactus.csv contains all information on specimens used in the RAD sequencing experiment.
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Centrifuge modelling database for dynamic response of homogeneous embankments resting on liquefiable sand layer containing fines
SAADE, ChedidUpdated 4 Mar 2026
… mixture of sand and non-plastic and the physical model was subjected to a sequence of seismic signals.
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IWGSC - Public markers
Rimbert, HélèneUpdated 27 Jun 2024
Lien vers la fiche source Fasta sequences of public triticum aestivum markers. These sequences were used in the …
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Centrifuge Modelling database for dynamic response of homogeneous embankments resting on liquefiable clean sand layer subjected to a series of dynamic excitations
SAADE, ChedidUpdated 4 Mar 2026
… using clean Hostun sand and subjected to a sequence of seismic signals. In this dataset, the data of …
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RNA sequencing data for responses to drought stress and/or clubroot pathogen infection in developing seeds of Brassica napus
Bianchetti, GregoireUpdated 1 Jul 2021
… The raw reads are available under accession PRJNA738318 at NCBI Sequence Read Archive (SRA) repository. The dataset is …
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Supplementary tables for "Whole blood transcriptome profiles of trypanotolerant and trypanosusceptible cattle highlight a differential modulation of metabolism and immune response during infection by Trypanosoma congolense"
Thévenon, SophieUpdated 13 Jun 2024
Lien vers la fiche source Supplementary figures and tables for "Whole blood transcriptome profiles of trypanotolerant and trypanosusceptible …
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NLRome assemblies of Cucumis melo derived from Nanopore adaptive sampling sequencing
BELINCHON MORENO, JAVIERUpdated 25 Oct 2024
… GENERAL METADATA Project description - Target sequencing and assembly of NLR clusters Organism - Cucumis melo Sequencing platform - PromethION (Oxford …
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Replication dataset for "hicream: a flexible framework to identify significantly different regions in Hi-C data"
Vialaneix, NathalieUpdated 27 Mar 2026
… 3D chromatine conformation data obtained by high-throughput sequencing, corresponding to the experiments used in the preprint "hicream …
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Transposable element annotation of Botrytis cinerea B05.10
Amselem, JoelleUpdated 16 Dec 2024
… The TE Consensus library from the TEdenovo (36 consensus) was filtered out for consensus sequences classified as SSR …
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IBIS-Dataset 2-Genome-transcriptomics and biochemical data of soy juice fermented with Lactiplantibacillus plantarum CIRM-BIA777
Falentin, HélèneUpdated 3 Nov 2025
Lien vers la fiche source This dataset comprises samples names, sugar and acid quantifications of soy juices fermented …
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Functional Annotation for 797 plant ns Lipid Transfer Protein
de Lamotte, FrédéricUpdated 11 Aug 2025
… It might be useful for any studies in sequence-structure-function relationships (this is the largest dataset used …
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MetaChick: characterization of the chicken caecal metagenome by deep shotgun sequencing
PLAZA ONATE, FlorianUpdated 10 Jun 2024
… Sequencing data QC and metagenomic assembly First, sequencing adapters removal and read trimming was performed with fastxtend . Reads …
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Supplementary table for chapter 3 of manuscript: "Metagenomic analysis of cultivated and wild carrots reveals different virome fingerprints and provides insight into viral fluxes between carrot populations"
Schönegger, DeborahUpdated 13 Dec 2022
Lien vers la fiche source Supplementary table S4 "Results for the co-occurrence analysis presented in Figure 5 …
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Data and scripts for the manuscript "Weak but consistent genomic signals of intragenerational selection during estuarine migration in the European eel (Anguilla anguilla)"
Oddou-Muratorio, SylvieUpdated 3 Feb 2026
Lien vers la fiche source This directory contains most of the datasets and scripts used in the article …
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Gene sequence variation data for 3407 adult individuals from 164 range-wide populations of 7 widely distributed European forest tree species
Pyhäjärvi, TanjaUpdated 5 Aug 2025
Lien vers la fiche source General description This dataset contains the targeted gene sequence variation data (vcf files …
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Ralstonia solanacearum species complex egl reference database
Cellier, GillesUpdated 19 Feb 2025
Lien vers la fiche source This database centralizes partial endoglucanase ( egl ) gene sequences dedicated to the Ralstonia solanacearum …
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Assessing varietal homogeneity in pooled samples of cross-pollinated crops using genetic markers
Barre, PhilippeUpdated 15 Jul 2025
… individual 1 of Aberavon replicate 1 sequence forward - ABER_B_3.2 : pool of Aberavon replicate 3 sequence …
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Genetic variants from 567 French cattle samples
Iampietro, CaroleUpdated 22 Apr 2025
… Sequences were aligned on the ARS-UCD1.2 reference genome assembly sequence using bwa mem and small genomic …
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MicroReset: characterization of the rabbit (Oryctolagus cuniculus) fecal metagenome and resistome by deep shotgun sequencing
PLAZA ONATE, FlorianUpdated 6 Aug 2025
… The sequencing data is available under the BioProject PRJEB50625 . Metagenomic Assembly Raw sequencing reads were first pre-processed …
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