Search results for Annotation
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271 datasets for “Annotation”
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Enriched gene ontology terms in upregulated genes at the transition from adult females to eggs
Danchin, EtienneUpdated 27 May 2021
… format, with the last common providing the accession numbers of proteins annotated with the GO term under consideration.
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Fermented vegetables metavirome - viral metagenomic dataset
CANTUTI, GENDRE, JULIAUpdated 17 Jan 2025
… level vOTUs, selection of viral contigs and their annotation, mapping to obtain an abundance table. These data were …
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Genetic and metabolic resources for Sipha maydis multi-symbiotic system
Renoz, FrancoisUpdated 12 Nov 2024
… This dataset contains genomic and functional annotation information of S. maydis genome and its di-symbiotic system, together …
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Transcriptions des brouillons du roman "La Réticence" de Jean-Philippe Toussaint
Combe, BrigitteUpdated 10 Apr 2025
Lien vers la fiche source Les brouillons tapuscrits et annotés de la Réticence (Jean-Philippe Toussaint, Éditions de …
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Enriched gene ontology terms in upregulated genes at the transition from J2 to J3-J4 larval stages
Danchin, EtienneUpdated 27 May 2021
… format, with the last common providing the accession numbers of proteins annotated with the GO term under consideration.
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Enriched gene ontology terms in upregulated genes at the transition from J3-J4 larvae to adult females
Danchin, EtienneUpdated 27 May 2021
… format, with the last common providing the accession numbers of proteins annotated with the GO term under consideration.
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Silver Corpus for Plant-based Food Fermentation Information Extraction
ZHU, XINGYUUpdated 2 Mar 2026
… The data was automatically annotated using a Large Language Model (LLM), resulting in a structured JSON format that …
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Feature-matching based overlay of 7 years of high-resolution imagery collected by the TEMPO ecological module (EMSO-Azores observatory)
Univ Brest, CNRS, Ifremer, UMR6197 BEEP, F-29280 Plouzané, FranceUpdated 24 Dec 2025
… This homography transformation was calculated by a combination of feature-matching algorithm and manual annotation of keypoints. All …
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A catalog of genes and species of the human oral microbiota
Le Chatelier, EmmanuelleUpdated 12 Aug 2025
… MSPs Taxonomic Annotation Taxonomic annotation for the MSPs was performed by aligning all core and accessory genes against …
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PAGURE example dataset from data acquisition to the computation of Essential Biodiversity Variables and Essential Ocean Variables
IFREMER, UMR MARBEC, Sète, FranceUpdated 26 Jun 2024
… Atlantic) Files include metadata for the sampling stations, annotation files. A readme tex file contains the links to …
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A catalog of genes, genomes and species of the cat (Felis catus) intestinal microbiota
PLAZA ONATE, FlorianUpdated 11 Oct 2023
… MAGs and MSPs taxonomic annotation Dereplicated MAGs were annotated with GTDB-Tk based on GTDB r214. Then, MAGs …
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Thésaurus INRAE
National research institute for agriculture food and environmentUpdated 11 Aug 2025
… It serves as a repository within the institute to index and annotate documents, web pages, activity descriptions and …
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CabriTrack: Accelerometer data for automated behavioural monitoring of grazing goats
Bonneau, MathieuUpdated 12 May 2026
Lien vers la fiche source This dataset contains annotated acceleration data of goats grazing outdoors. We used 59 …
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Data from "QTL mapping reveals novel genes and mechanisms underlying variations in H2S production during alcoholic fermentation in Saccharomyces cerevisiae"
De Guidi, IreneUpdated 13 Dec 2023
… A fourth file provides an annotation of the 59A genome after transfer from S288C with RATT.
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Supporting data and code for the African Rice Panreference produced by the frangiPANe software
Tranchant, ChristineUpdated 27 Jan 2023
… We annotated in addition 3,252 new genes absent from the reference. The authors acknowledge the IRD i …
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Aquaporins in Pearl Millet: genomic, coding and protein sequences
Grondin, AlexandreUpdated 2 Sept 2020
… We identified and annotated 33 AQP genes in pearl millet among which ten encoded Plasma Membrane Intrinsic Proteins …
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Accompanying Dataset and Python Code for Reproducibility and Implementation of the IR-TDIBC Method
Roncen, RémiUpdated 22 Sept 2025
… the IR-TDIBC method to their specific setups. Annotations and explanations within the code for ease of understanding …
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Development of a new version of the grapevine reference genome assembly (12X.v2) based on genetic maps and paired-end sequences.
Canaguier, AurélieUpdated 4 Jul 2025
… reference genome assembly (12X.v2) and of its annotation (V3)” by Canaguier A, Grimplet J, Di Gaspero G …
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Meloidogyne enterolobii E1834 genome structure analysis
Poullet, MarineUpdated 27 Sept 2024
… Subsequently, we used gene location information extracted from the GFF3 annotation file of EuGene, along with homology information …
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MicroReset: characterization of the rabbit (Oryctolagus cuniculus) fecal metagenome and resistome by deep shotgun sequencing
PLAZA ONATE, FlorianUpdated 6 Aug 2025
… Taxonomic Annotation of MSPs MAGs representing each species were taxonomically annotated using GTDB-Tk with GTDB release r214 …
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