Search results for Annotation
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271 datasets for “Annotation”
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Minimal dataset for SQuIRE usage on Prunus Marouch
Lefebvre, MarieUpdated 28 Sept 2023
… the sequence genome of Marouch (.fasta) (2) the annotation of Marouch genome (.gff3) (3) the rmsk informations from …
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Dioscorea alata orthologous groups identified by comparative genomics approach
Zotta Mota AnaUpdated 30 May 2023
… We improved the functional annotation of the three pathways with 48% more genes. A total of 18 candidate …
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Expression of protein-coding genes
Da Rocha, MartineUpdated 13 Mar 2026
… the predicted genes from the Xiphinema index GFF annotation using RSEM (version 1.3.1). Uniquely mapped reads …
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Viral OTU from blood and fecal human samples
Petit, Marie AgnesUpdated 21 Jun 2024
… Data are organized as one file per vOTU, in the gff format (annotations plus DNA sequence)
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The Digitised Dataset of Slovenian Folk Song Ballads
Borsan, Vanessa NinaUpdated 20 Dec 2024
Lien vers la fiche source Slovenian Folk Song Ballads 404 Slovenian folk song ballads with family themes, collected …
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16S-ITS-23S-DB database
Pascal, GéraldineUpdated 28 Sept 2023
… The annotation file (GFF) was parsed to identify the 16S and 23S genes. Identification was performed by applying …
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Gene ontology of proteins detected in different milk fractions and lactation stages of dairy cows
Delosière, MylèneUpdated 21 Jun 2021
Lien vers la fiche source The Gene Ontology (GO) dataset provided functional annotations of proteins, from milk fractions …
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Philippines - TM Open Buildings
Thinking Machines Data ScienceUpdated 15 Apr 2025
… building outlines covering 12 Philippine cities with detailed annotations on building and roof attributes as seen over satellite …
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A catalog of genes and species of the brown rat (Rattus norvegicus) gut microbiota
PLAZA ONATE, FlorianUpdated 19 Sept 2023
… Taxonomic annotation of Metagenomic Species MGS taxonomic annotation was performed by aligning all core and accessory genes against …
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Datasets reporting s-PLSDA results and gene ontology enrichment of proteins identified in plasma and milk of dairy cows fed lipid supplements.
Delosière, MylèneUpdated 4 Apr 2023
… The Gene Ontology (GO) dataset provided functional annotations of proteins from plasma and milk fractions, according to GO …
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Concrete printing defects dataset for quality process monitoring using computer vision
Rill-Garcia, RodrigoUpdated 30 Jan 2024
… The dataset images are completed by the annotations dedicated to the detection of defects and anomalies that can …
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IBIS - Dataset 1 - Genome, transcriptomics and targeted metabolomics of Lactobacillus delbrueckii subsp. delbrueckii CIRM-BIA865 in soy juice
Falentin, HélèneUpdated 22 Oct 2024
Lien vers la fiche source This dataset comprises the complete and annotated genome of Lactobacillus delbrueckii subsp. delbrueckii …
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Updated Metagenomic Species Pan-genomes (MSPs) of the human gastrointestinal microbiota
Plaza Onate, FlorianUpdated 11 Aug 2025
… MSPs taxonomic annotation MSPs taxonomic annotation was performed by aligning MSP core and accessory genes against representative genomes …
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Caractérisation granulométrique du lit de la basse vallée de l'Ain par imagerie sub-aquatique (2014)
CNRS UMR 5600 EVS - ENS de LyonUpdated 4 Sept 2017
… 10+") et mesure des longueurs d'axe dans ArcGIS (n = 186 images annotées de qualité bonne à mauvaise).
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Enriched GO terms in predicted dorsal gland effectors
Danchin, EtienneUpdated 11 May 2021
… We used the functional annotation produced by InterProScan to search for enriched GO terms in these predicted DG …
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A catalog of genes and species of the human skin microbiota
PLAZA ONATE, FlorianUpdated 4 Oct 2023
… MSPs taxonomic annotation Taxonomic annotation was performed by alignment of all core and accessory genes against representative genomes …
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MTBLS752: Untargeted food contaminant detection using UHPLC-HRMS combined with multivariate analysis: Feasibility study on tea (Dataset 1 - Development)
CLADIERE, MATHIEUUpdated 18 Feb 2026
… Data were treated using Independent Components Analysis, and data mining strategies developed to automatically detect and annotate ions …
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MTBLS754: Untargeted food contaminant detection using UHPLC-HRMS combined with multivariate analysis: Feasibility study on tea (Dataset 2 - Validation)
Cladière, MathieuUpdated 18 Feb 2026
… Data were treated using Independent Components Analysis, and data mining strategies developed to automatically detect and annotate ions …
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MIMIC2: Murine Intestinal Microbiota Integrated Catalog v2
PLAZA ONATE, FlorianUpdated 11 Jun 2025
… Then, taxonomic annotation of MMGC genomes was propagated to the corresponding MSPs. For the MSPs without any corresponding …
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A catalog of genes, genomes and species of the dog (Canis lupus familiaris) intestinal microbiota
PLAZA ONATE, FlorianUpdated 12 Aug 2025
… MAGs and MSPs taxonomic annotation Dereplicated MAGs were annotated with GTDB-Tk based on GTDB r220. Then, MAGs …
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