Search results for MSP
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20 datasets for “MSP”
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Metagenomic Species Pan-genomes (MSPs) of the human gastrointestinal microbiota
Plaza Oñate, FlorianUpdated 21 Dec 2020
Lien vers la fiche source Metagenomic Species Pan-genomes (MSPs) of the human gastrointestinal microbiota built by binning …
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Main Spectra Profiles (MSP) compatibles with the Brucker MS system for identification of plant-pathogenic bacteria
Portier, PerrineUpdated 28 Jul 2023
… MSPs These MSPs can be included in the built-in program of the Brucker MS system, permitting the …
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Updated Metagenomic Species Pan-genomes (MSPs) of the human gastrointestinal microbiota
Plaza Onate, FlorianUpdated 11 Aug 2025
… MSPs taxonomic annotation MSPs taxonomic annotation was performed by aligning MSP core and accessory genes against representative genomes …
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Planification maritime
ShomUpdated 12 Dec 2024
… maritime (couche « MSP Spatial Plan ») ainsi que les emprises des zones de vocations correspondantes (couche « MSP Zoning Element …
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Microbial species abundances from public project PRJEB6337 on liver cirrhosis
Champion, CamilleUpdated 27 Jul 2023
… Abundance of each MSP is computed as the mean abundance of 100 marker genes selected for each MSP …
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MicroReset: characterization of the rabbit (Oryctolagus cuniculus) fecal metagenome and resistome by deep shotgun sequencing
PLAZA ONATE, FlorianUpdated 6 Aug 2025
… Co-abundant genes were grouped into 1,053 Metagenomic Species Pan-genomes (MSPs) using MSPminer . Taxonomic Annotation of …
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A catalog of genes, genomes and species of the dog (Canis lupus familiaris) intestinal microbiota
PLAZA ONATE, FlorianUpdated 12 Aug 2025
… gene clusters that likely belong to the same microbial species) using MSPminer . MAGs and MSPs taxonomic annotation Dereplicated …
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Données sur l'impact des pressions toxiques multiples sur les écosystèmes aquatiques du bassin versant du Rhône (2010-2018)
CNRS UMR 5600 EVS - ENS de LyonUpdated 29 Nov 2023
Lien vers la fiche source Détermination de l'indice msPAF (fraction d'espèces affectées par un mélange de …
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A catalog of genes and species of the human skin microbiota
PLAZA ONATE, FlorianUpdated 4 Oct 2023
… clusters of co-abundant genes that likely belong to the same microbial species) using MSPminer . MSPs taxonomic annotation …
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MetaChick: characterization of the chicken caecal metagenome by deep shotgun sequencing
PLAZA ONATE, FlorianUpdated 10 Jun 2024
… gene clusters that likely belong to the same microbial species) using MSPminer . MAGs and MSPs taxonomic annotation Dereplicated …
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MIMIC2: Murine Intestinal Microbiota Integrated Catalog v2
PLAZA ONATE, FlorianUpdated 11 Jun 2025
… Then, taxonomic annotation of MMGC genomes was propagated to the corresponding MSPs. For the MSPs without any corresponding …
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An updated catalog of genes and species of the pig gut microbiota
Plaza Onate, FlorianUpdated 19 Sept 2023
… Co-abundant genes were binned in 1523 Metagenomic Species Pan-genomes (MSPs) for which we provide taxonomic labels …
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A catalog of genes, genomes and species of the cat (Felis catus) intestinal microbiota
PLAZA ONATE, FlorianUpdated 11 Oct 2023
… gene clusters that likely belong to the same microbial species) using MSPminer . MAGs and MSPs taxonomic annotation Dereplicated …
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A catalog of genes and species of the human oral microbiota
Le Chatelier, EmmanuelleUpdated 12 Aug 2025
… Then, co-abundant genes were binned into 853 Metagenomic Species Pan-genomes (MSPs) using MSPminer . MSPs Taxonomic Annotation …
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Maisons de santé pluriprofessionnelles
Département de l'IsèreUpdated 25 Jun 2024
… Ainsi, une MSP peut faire partie d'un pôle de santé. - Les Centres de Soins Non-Programmés sont …
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Data of the article "Divergent and stabilizing selection shape the phenotypic space of Arabidopsis thaliana", published in PLOS Biology, 2025
UMR 5175 Centre d'Ecologie Fonctionnelle et EvolutiveUpdated 17 Dec 2025
… https://github.com/msprzybylska/Analysis_PhenSpace
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W4M00004_GCMS-Algae
Yann GuittonUpdated 12 Dec 2024
… The peakspectra.msp file can be exported and search locally against NIST database with MSsearch software (see "how …
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MetaNutriUnify, a curated and unified human gut metagenomics and nutritional data collection
Daussin, AntoineUpdated 29 Nov 2024
… Metagenomic Species Pangenomes (MSP) species abundance table and related GTDB taxonomy (GTBD-tk version r220) (final_msp.7z …
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&GRAMO_FAT
GUITTON, YannUpdated 18 Dec 2025
… Data-dependent acquisition files were processed with msPurity workflow in Galaxy workflow4metabolomics. The outputs obtained were then uploaded …
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A catalog of genes and species of the brown rat (Rattus norvegicus) gut microbiota
PLAZA ONATE, FlorianUpdated 19 Sept 2023
… This table was submitted to MSPminer and Canopy . A total of 1627 clusters of co-abundant genes or …
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